Strain Fitness in Pseudomonas simiae WCS417 around PS417_19290

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,183,099	-		PS417_19280	0.46	-0.1
4,183,125	+		PS417_19280	0.51	-1.3
4,183,141	+		PS417_19280	0.53	-2.6
4,183,184	-		PS417_19280	0.60	-1.3
4,183,276	-		PS417_19280	0.76	-1.5
4,183,323	-		PS417_19280	0.84	+0.8
4,183,350	+		PS417_19280	0.88	-0.4
4,183,351	-		PS417_19280	0.89	+1.3
4,183,384	+				-0.8
4,183,395	+				-0.3
4,183,395	+				-0.8
4,183,395	+				+0.6
4,183,395	+				-0.6
4,183,396	-				+0.4
4,183,396	-				-0.1
4,183,396	-				-0.5
4,183,396	-				+0.9
4,183,412	-				+0.2
4,183,416	+				+0.7
4,183,442	+				+0.2
4,183,559	+		PS417_19285	0.23	+0.1
4,183,762	+		PS417_19285	0.62	+0.1
4,183,980	+				-0.0
4,183,980	+				+0.1
4,183,980	+				+0.2
4,183,980	+				+0.4
4,183,980	+				+0.2
4,183,981	-				+0.5
4,183,981	-				-1.6
4,183,981	-				+0.1
4,183,981	-				-1.6
4,183,981	-				+0.3
4,183,981	-				-1.0
4,183,983	-				+0.4
4,184,045	-				+1.1
4,184,050	+				-0.8
4,184,051	-				-1.6
4,184,068	-				-0.4
4,184,068	-				+0.7
4,184,124	+				-0.2
4,184,125	-				+0.5
4,184,125	-				-0.3
4,184,151	+				-0.6
4,184,151	+				+0.8
4,184,214	+				-0.1
4,184,215	-				+1.7
4,184,397	+		PS417_19290	0.18	-0.2
4,184,482	-		PS417_19290	0.23	+0.3
4,184,486	-		PS417_19290	0.23	-3.3
4,184,596	+		PS417_19290	0.29	-0.1
4,184,597	-		PS417_19290	0.29	+1.1
4,184,687	-		PS417_19290	0.34	+0.2
4,184,792	+		PS417_19290	0.40	-0.6
4,184,793	-		PS417_19290	0.40	-0.7
4,184,829	+				+2.4
4,184,944	+		PS417_19290	0.48	+0.3
4,184,945	-		PS417_19290	0.48	+3.1
4,184,945	-		PS417_19290	0.48	+0.8
4,184,982	+		PS417_19290	0.50	-1.6
4,184,982	+		PS417_19290	0.50	+0.4
4,184,983	-		PS417_19290	0.50	+0.4
4,184,983	-		PS417_19290	0.50	-1.1
4,185,132	+		PS417_19290	0.58	-0.4
4,185,132	+		PS417_19290	0.58	-0.3
4,185,133	-		PS417_19290	0.58	+0.1
4,185,249	+		PS417_19290	0.65	+2.1
4,185,249	+		PS417_19290	0.65	-1.9
4,185,249	+		PS417_19290	0.65	+0.3
4,185,250	-		PS417_19290	0.65	+0.4
4,185,250	-		PS417_19290	0.65	+0.9
4,185,250	-		PS417_19290	0.65	-0.3
4,185,250	-		PS417_19290	0.65	+1.1
4,185,253	+		PS417_19290	0.65	-0.3
4,185,253	+		PS417_19290	0.65	+0.4
4,185,254	-		PS417_19290	0.65	+0.4
4,185,254	-		PS417_19290	0.65	+0.0
4,185,255	+		PS417_19290	0.65	+0.0
4,185,256	-		PS417_19290	0.65	+0.2
4,185,256	-		PS417_19290	0.65	-1.0
4,185,430	-		PS417_19290	0.75	+0.3
4,185,678	+		PS417_19290	0.88	+0.7
4,185,679	-		PS417_19290	0.88	+0.1
4,185,699	+		PS417_19290	0.89	-0.1
4,185,700	-				+1.1
4,185,832	+				+0.9
4,185,844	+				+0.3
4,185,844	+				+0.1
4,185,865	+				-0.4
4,185,865	+				+0.3
4,185,911	-				+1.1
4,185,937	-				-0.2
4,185,937	-				-0.7
4,185,959	-				-0.2
4,185,959	-				-0.2
4,186,038	-				+0.1
4,186,202	-				+1.2
4,186,276	+		PS417_19295	0.11	+0.5
4,186,287	+		PS417_19295	0.15	-0.0
4,186,287	+		PS417_19295	0.15	-2.5
4,186,287	+		PS417_19295	0.15	-0.1
4,186,288	-		PS417_19295	0.15	-0.0
4,186,288	-		PS417_19295	0.15	+0.3
4,186,288	-		PS417_19295	0.15	+0.3
4,186,655	+		PS417_19300	0.26	-0.2
4,186,698	+		PS417_19300	0.42	+0.7
4,186,699	-		PS417_19300	0.43	+0.5
4,186,699	-		PS417_19300	0.43	-0.1
4,186,787	+		PS417_19300	0.75	+0.6
4,186,788	-		PS417_19300	0.76	-0.2
4,186,820	-		PS417_19300	0.87	+0.4
4,186,839	-				-0.8
4,186,854	+				-2.5
4,186,886	+				+0.0