Strain Fitness in Pseudomonas simiae WCS417 around PS417_19255

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,177,103	+		PS417_19240	0.69	+0.4
4,177,104	-		PS417_19240	0.69	-0.5
4,177,104	-		PS417_19240	0.69	-0.9
4,177,273	+		PS417_19240	0.83	+1.5
4,177,320	-		PS417_19240	0.87	-2.8
4,177,320	-		PS417_19240	0.87	+0.6
4,177,495	+				-0.5
4,177,496	-				-0.9
4,177,496	-				-2.3
4,177,528	-				-1.5
4,177,904	+				-0.5
4,177,905	-				-0.4
4,177,905	-				+0.9
4,177,909	-				-1.4
4,178,058	+				+0.7
4,178,059	-				+0.0
4,178,059	-				+0.8
4,178,087	+				-0.3
4,178,087	+				-0.5
4,178,159	-				-0.4
4,178,252	-		PS417_19255	0.19	-0.5
4,178,257	+		PS417_19255	0.20	-0.2
4,178,257	+		PS417_19255	0.20	-1.5
4,178,257	+		PS417_19255	0.20	-1.2
4,178,258	-		PS417_19255	0.20	-2.6
4,178,464	+		PS417_19255	0.45	+0.5
4,178,465	-		PS417_19255	0.45	-1.3
4,178,516	+		PS417_19255	0.51	-0.9
4,178,658	-		PS417_19255	0.69	-0.1
4,178,733	+		PS417_19255	0.78	+0.6
4,178,750	+		PS417_19255	0.80	+0.4
4,178,860	-				-0.3
4,178,920	-				-1.3
4,178,944	-				-1.9
4,178,944	-				-0.6
4,179,000	-				+0.1
4,179,064	+				+0.7
4,179,162	+				+0.4
4,179,177	-				-1.4
4,179,180	+				+1.1
4,179,181	-				-1.6
4,179,181	-				-2.4
4,179,236	-				-1.1
4,179,322	+				-0.4
4,179,323	-				-0.0
4,179,400	-				+1.5
4,179,580	+				-2.0
4,179,619	+				-0.4
4,179,641	+				+1.1
4,179,850	+		PS417_19265	0.19	+0.1