Strain Fitness in Pseudomonas simiae WCS417 around PS417_18765

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,069,634	+		PS417_18755	0.67	-0.5
4,069,720	-		PS417_18755	0.86	+1.3
4,069,820	+				+0.5
4,069,820	+				-0.5
4,069,820	+				-1.2
4,069,820	+				+0.5
4,069,821	-				+1.1
4,069,821	-				-0.4
4,069,821	-				+0.5
4,069,821	-				-0.6
4,069,821	-				-0.3
4,069,958	-				-2.9
4,069,958	-				+1.3
4,069,978	+		PS417_18760	0.12	-2.8
4,070,055	+		PS417_18760	0.25	+0.0
4,070,055	+		PS417_18760	0.25	+1.7
4,070,055	+		PS417_18760	0.25	-0.5
4,070,289	+		PS417_18760	0.66	-0.0
4,070,302	-		PS417_18760	0.69	-0.7
4,070,542	+				+0.9
4,070,600	+		PS417_18765	0.22	+0.6
4,070,600	+		PS417_18765	0.22	-0.1
4,070,601	-		PS417_18765	0.23	-0.9
4,070,601	-		PS417_18765	0.23	+3.0
4,070,601	-		PS417_18765	0.23	-0.3
4,070,746	+		PS417_18765	0.85	+0.4
4,070,747	-		PS417_18765	0.85	+1.1
4,070,843	-				-1.9
4,070,843	-				+0.3
4,070,969	-				+0.1
4,071,005	+				-1.4
4,071,020	-				-2.5
4,071,131	+				-0.1
4,071,437	+		PS417_18770	0.36	+0.2
4,071,537	+		PS417_18770	0.46	+0.1
4,071,581	-		PS417_18770	0.51	+0.1
4,071,701	+		PS417_18770	0.63	+0.5
4,071,701	+		PS417_18770	0.63	+1.2
4,071,748	+				+1.1
4,071,770	+		PS417_18770	0.70	+0.1
4,071,771	-		PS417_18770	0.70	+0.8