Strain Fitness in Pseudomonas simiae WCS417 around PS417_18425

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
4,009,479	-				-2.0
4,009,711	+		PS417_18415	0.86	-1.3
4,009,764	+				-1.2
4,009,764	+				+0.3
4,009,879	+		PS417_18420	0.19	+0.3
4,009,894	+		PS417_18420	0.21	-0.7
4,009,894	+		PS417_18420	0.21	+0.1
4,009,895	-		PS417_18420	0.21	-1.9
4,010,258	-		PS417_18420	0.74	+0.6
4,010,258	-		PS417_18420	0.74	-3.2
4,010,312	+		PS417_18420	0.81	+1.6
4,010,313	-		PS417_18420	0.82	-1.7
4,010,628	-		PS417_18425	0.41	-1.4
4,010,844	+				+2.4
4,010,884	+				+2.2
4,010,943	-				-0.9
4,010,955	+				+1.7
4,010,955	+				+1.7
4,010,956	-				-1.9
4,010,975	+				-0.3
4,010,975	+				+3.0
4,010,975	+				+0.9
4,011,029	+				+0.8
4,011,029	+				+0.5
4,011,030	-				-1.9
4,011,034	+				+1.0
4,011,034	+				+1.1
4,011,035	-				-0.4
4,011,035	-				-1.4
4,011,035	-				-1.5
4,011,082	-				-0.8
4,011,104	-				-1.7
4,011,105	+				-0.8
4,011,105	+				-1.5
4,011,105	+				-1.5
4,011,106	-				-1.7
4,011,171	+		PS417_18430	0.37	-1.9
4,011,434	+				-1.7
4,011,434	+				+1.1
4,011,434	+				-2.1
4,011,435	-				-0.5
4,011,547	+		PS417_18435	0.18	-2.1
4,011,716	+				-0.5
4,011,717	-		PS417_18435	0.89	+0.1
4,011,773	+				-0.9
4,011,777	+				-1.3
4,011,777	+				+0.2
4,011,778	-				-2.4
4,011,797	+				-1.3
4,011,797	+				+1.1
4,011,797	+				-1.7
4,011,798	-				-0.5
4,011,798	-				+0.8
4,011,798	-				-1.4
4,011,798	-				+0.1