Strain Fitness in Pseudomonas simiae WCS417 around PS417_17940

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,913,823	+		PS417_17930	0.76	+1.4
3,914,090	-				+0.9
3,914,262	-		PS417_17935	0.27	+0.5
3,914,330	-		PS417_17935	0.43	+2.0
3,914,480	+		PS417_17935	0.78	+0.6
3,914,480	+				+2.0
3,914,480	+		PS417_17935	0.78	-0.3
3,914,480	+		PS417_17935	0.78	-0.6
3,915,034	+		PS417_17940	0.28	-0.4
3,915,034	+		PS417_17940	0.28	-1.4
3,915,056	+		PS417_17940	0.30	-2.3
3,915,057	-		PS417_17940	0.30	-0.8
3,915,074	+		PS417_17940	0.31	-0.7
3,915,075	-		PS417_17940	0.31	-1.2
3,915,323	+		PS417_17940	0.50	-1.0
3,915,323	+		PS417_17940	0.50	+1.1
3,915,323	+		PS417_17940	0.50	+1.4
3,915,440	+		PS417_17940	0.58	+0.2
3,915,735	+		PS417_17940	0.80	+1.8
3,915,858	+		PS417_17940	0.89	+0.3
3,916,032	+				+0.4
3,916,104	+				-1.0
3,916,105	-				-0.3
3,916,105	-				-0.2
3,916,136	+				+0.1
3,916,137	-				+1.1
3,916,227	+				-0.9
3,916,335	+				-0.4
3,916,335	+				-0.5
3,916,335	+				+2.4
3,916,350	-				+0.4
3,916,350	-				+0.7
3,916,552	-		PS417_17945	0.56	-1.8
3,916,764	+				+0.7
3,916,764	+				+0.7
3,916,816	+				-2.1
3,916,816	+				-0.3
3,916,817	-				+0.0
3,916,817	-				+0.0
3,916,817	-				-2.5
3,916,844	-				-0.3
3,916,893	+				+0.9