Strain Fitness in Pseudomonas simiae WCS417 around PS417_17895
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,904,287 | + | PS417_17885 | 0.78 | -1.3 | |
| 3,904,287 | + | PS417_17885 | 0.78 | +1.3 | |
| 3,904,298 | - | PS417_17885 | 0.79 | -0.4 | |
| 3,904,455 | + | -0.0 | |||
| 3,904,532 | - | +0.7 | |||
| 3,904,548 | - | PS417_17890 | 0.11 | +0.8 | |
| 3,904,548 | - | PS417_17890 | 0.11 | +0.7 | |
| 3,904,548 | - | PS417_17890 | 0.11 | +0.2 | |
| 3,904,970 | + | PS417_17890 | 0.63 | -0.1 | |
| 3,905,072 | - | PS417_17890 | 0.76 | -0.9 | |
| 3,906,014 | + | +0.3 | |||
| 3,906,123 | - | PS417_17900 | 0.12 | -2.0 | |
| 3,906,123 | - | PS417_17900 | 0.12 | +0.1 | |
| 3,906,338 | + | +1.0 | |||
| 3,906,421 | + | PS417_17900 | 0.43 | -2.3 | |
| 3,906,901 | + | +2.0 | |||
| 3,906,901 | + | -0.6 |
Or see this region's nucleotide sequence