Strain Fitness in Pseudomonas simiae WCS417 around PS417_17750

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,873,550	-		PS417_17745	0.38	+0.3
3,873,613	+		PS417_17745	0.44	+0.3
3,873,619	+		PS417_17745	0.45	-0.2
3,873,620	-		PS417_17745	0.45	+0.1
3,874,117	+		PS417_17745	0.90	+0.0
3,874,144	+				+0.5
3,874,225	+				-0.1
3,874,260	+				-1.6
3,874,260	+				+1.6
3,874,260	+				-0.1
3,874,261	-				+0.1
3,874,261	-				+1.3
3,874,264	+				-0.2
3,874,264	+				-0.3
3,874,264	+				+0.6
3,874,265	-				+0.0
3,874,320	-				+0.3
3,874,371	+				-1.7
3,874,410	-				-1.3
3,874,633	-		PS417_17750	0.25	+0.2
3,874,672	+		PS417_17750	0.27	-1.0
3,874,923	-		PS417_17750	0.45	+1.0
3,875,058	-		PS417_17750	0.54	+0.2
3,875,129	+		PS417_17750	0.59	-2.6
3,875,129	+		PS417_17750	0.59	+0.6
3,875,130	-		PS417_17750	0.59	+2.1
3,875,136	-		PS417_17750	0.60	-0.4
3,875,139	-		PS417_17750	0.60	-1.3
3,875,361	-		PS417_17750	0.75	+1.2
3,875,697	+				-0.4
3,875,733	+				-0.1
3,875,734	-				-0.3
3,875,734	-				-0.1
3,875,782	+				+0.4
3,875,782	+				+0.4
3,875,821	-				-0.5
3,875,900	-		PS417_17755	0.16	-1.0
3,875,928	+		PS417_17755	0.24	-2.5
3,876,024	-		PS417_17755	0.51	-0.4
3,876,178	+				-0.4
3,876,281	+				+0.2
3,876,389	+				+0.2
3,876,390	-				-1.4
3,876,390	-				+1.0
3,876,459	+				-1.0
3,876,552	+				-2.5
3,876,552	+				-0.2
3,876,553	-				+3.6
3,876,553	-				-1.8
3,876,553	-				+0.3
3,876,636	+				+1.3