Strain Fitness in Pseudomonas simiae WCS417 around PS417_17315

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,781,202	-		PS417_17310	0.55	-0.1
3,781,215	-		PS417_17310	0.56	+0.1
3,781,417	-		PS417_17310	0.71	-0.1
3,781,569	-		PS417_17310	0.83	-0.2
3,781,620	+		PS417_17310	0.87	-0.1
3,781,620	+		PS417_17310	0.87	-0.6
3,781,801	+				-0.5
3,781,883	+				+0.0
3,781,944	+				-0.1
3,782,001	+				-0.2
3,782,040	+				-0.9
3,782,041	-				+0.5
3,782,041	-				+1.2
3,782,046	+				+0.1
3,782,046	+				-1.7
3,782,046	+				-1.9
3,782,047	-				-1.1
3,782,154	+		PS417_17315	0.14	-0.7
3,782,262	+		PS417_17315	0.21	-1.0
3,782,671	+				+0.9
3,782,671	+		PS417_17315	0.49	-1.4
3,782,672	-		PS417_17315	0.49	+0.3
3,782,686	+		PS417_17315	0.50	-2.1
3,782,885	+		PS417_17315	0.63	-1.7
3,782,886	-		PS417_17315	0.63	-0.3
3,782,886	-		PS417_17315	0.63	-0.3
3,782,886	-		PS417_17315	0.63	+0.3
3,783,219	+		PS417_17315	0.86	-2.1
3,783,244	+		PS417_17315	0.87	-1.0
3,783,246	+		PS417_17315	0.88	+0.0
3,783,246	+				-1.1
3,783,246	+		PS417_17315	0.88	-0.6
3,783,247	-		PS417_17315	0.88	+0.6
3,783,247	-		PS417_17315	0.88	+0.3
3,783,346	-				+0.0
3,783,387	+				-0.3
3,783,455	+				-0.2
3,783,496	-				+0.1
3,783,496	-				-0.1
3,783,981	+				+1.0
3,783,981	+				-0.7
3,784,101	+				+0.4
3,784,199	-		PS417_17320	0.12	-0.3
3,784,379	+		PS417_17320	0.25	+0.0
3,784,380	-		PS417_17320	0.25	-0.4