Strain Fitness in Pseudomonas simiae WCS417 around PS417_17230
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,764,737 | + | PS417_17225 | 0.83 | +2.1 | |
3,765,175 | - | -1.1 | |||
3,765,301 | - | +0.3 | |||
3,765,365 | - | +0.7 | |||
3,765,370 | + | +1.0 | |||
3,765,370 | + | +1.8 | |||
3,765,370 | + | -0.8 | |||
3,765,371 | - | -1.7 | |||
3,765,371 | - | +0.4 | |||
3,765,387 | - | +0.7 | |||
3,766,715 | + | +1.0 | |||
3,766,715 | + | +1.5 | |||
3,766,716 | - | -0.7 | |||
3,767,374 | - | +0.4 | |||
3,767,395 | - | +0.8 | |||
3,767,593 | - | PS417_17240 | 0.11 | -0.2 | |
3,767,593 | - | PS417_17240 | 0.11 | +0.7 |
Or see this region's nucleotide sequence