Strain Fitness in Pseudomonas simiae WCS417 around PS417_17225

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,761,803	+		PS417_17215	0.84	+0.1
3,761,804	-		PS417_17215	0.84	-1.7
3,761,979	+				-0.1
3,761,979	+				+1.2
3,762,087	+				-1.0
3,762,164	-				+2.5
3,762,165	+				-1.1
3,762,165	+				+0.4
3,762,165	+				-1.9
3,762,165	+				+0.9
3,762,166	-				-1.5
3,762,166	-				-0.1
3,762,166	-				+5.4
3,762,166	-				-0.8
3,762,166	-				-0.3
3,762,255	+				-1.7
3,762,255	+				-0.4
3,762,256	-				-1.7
3,762,256	-				-1.7
3,762,256	-				-0.8
3,762,256	-				-2.5
3,762,256	-				-2.2
3,762,294	-				-0.4
3,762,294	-				-1.4
3,762,312	+				-1.7
3,762,313	-				-0.1
3,762,313	-				-1.3
3,762,331	-				-1.7
3,762,615	-				-0.1
3,762,619	-				-1.5
3,762,688	-				-0.0
3,762,688	-				+0.4
3,762,700	-				+0.8
3,762,744	-				+1.4
3,762,761	+				-3.0
3,763,761	+		PS417_17225	0.42	+0.6
3,764,737	+		PS417_17225	0.83	+2.1
3,765,175	-				-1.1
3,765,301	-				+0.3
3,765,365	-				+0.7
3,765,370	+				+1.0
3,765,370	+				+1.8
3,765,370	+				-0.8
3,765,371	-				-1.7
3,765,371	-				+0.4
3,765,387	-				+0.7