Strain Fitness in Pseudomonas simiae WCS417 around PS417_16920

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,687,598	-		PS417_16915	0.19	-2.8
3,687,734	+		PS417_16915	0.30	-0.8
3,687,735	-		PS417_16915	0.30	-0.3
3,687,896	+		PS417_16915	0.44	-2.9
3,687,897	-		PS417_16915	0.44	+1.3
3,687,897	-		PS417_16915	0.44	+0.6
3,688,131	+		PS417_16915	0.63	+0.1
3,688,132	-		PS417_16915	0.63	+2.5
3,688,132	-				+2.7
3,688,534	-				-0.4
3,688,579	+				+0.7
3,688,755	-		PS417_16920	0.12	-1.3
3,688,773	+				-0.7
3,688,775	+		PS417_16920	0.13	-0.3
3,688,913	+		PS417_16920	0.22	-2.7
3,688,934	+		PS417_16920	0.24	-0.8
3,688,934	+		PS417_16920	0.24	-1.7
3,689,495	+		PS417_16920	0.62	-1.4
3,689,496	-		PS417_16920	0.63	-0.7
3,689,618	+		PS417_16920	0.71	-3.3
3,689,756	+		PS417_16920	0.80	-0.7
3,689,978	+				-0.6
3,689,979	-				-0.1
3,690,023	-				+3.0
3,690,023	-				-1.4
3,690,522	+				+0.7
3,690,545	+				+2.1
3,690,546	-				-0.2
3,690,590	-				-2.6
3,690,592	+				-1.9
3,690,631	-				+0.4
3,690,631	-				+0.7
3,690,667	+				-1.3
3,690,668	-				-1.0
3,690,686	+				+1.7
3,690,717	-				-0.1
3,690,717	-				-0.0
3,690,768	-				-0.6
3,690,796	+				+0.9
3,690,847	+				-0.1
3,690,848	-				+0.2