Strain Fitness in Pseudomonas simiae WCS417 around PS417_16215

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,552,585	-		PS417_16210	0.12	-0.5
3,552,675	-		PS417_16210	0.21	+1.2
3,552,683	+		PS417_16210	0.22	-2.4
3,552,697	-				+0.8
3,552,723	-		PS417_16210	0.26	-0.8
3,552,727	+		PS417_16210	0.26	-1.8
3,552,850	+		PS417_16210	0.38	+0.6
3,552,850	+		PS417_16210	0.38	+0.0
3,552,855	+		PS417_16210	0.39	-0.3
3,552,856	-		PS417_16210	0.39	+0.6
3,552,999	+		PS417_16210	0.53	-0.1
3,553,035	-		PS417_16210	0.57	-1.6
3,553,070	+		PS417_16210	0.60	-0.4
3,553,070	+		PS417_16210	0.60	+0.0
3,553,222	+		PS417_16210	0.75	+1.1
3,553,472	-				-0.8
3,553,487	+				+0.2
3,553,508	+				-0.6
3,553,508	+				+0.8
3,553,509	-				-0.1
3,553,551	-				+0.4
3,553,590	-				+1.0
3,554,101	-		PS417_16215	0.32	-0.1
3,554,312	+		PS417_16215	0.44	+0.4
3,554,312	+		PS417_16215	0.44	-1.2
3,554,312	+		PS417_16215	0.44	-2.4
3,554,334	-				-0.8
3,554,348	+		PS417_16215	0.46	+3.6
3,554,349	-		PS417_16215	0.46	-0.4
3,554,349	-		PS417_16215	0.46	-0.4
3,554,549	+		PS417_16215	0.57	-0.8
3,554,609	+		PS417_16215	0.61	+0.1
3,554,741	+				-0.8
3,554,742	-		PS417_16215	0.68	-1.5
3,554,742	-		PS417_16215	0.68	+0.8
3,554,912	+		PS417_16215	0.78	+0.1
3,554,913	-		PS417_16215	0.78	-1.2
3,554,913	-		PS417_16215	0.78	-2.1
3,554,913	-		PS417_16215	0.78	-0.8
3,554,913	-		PS417_16215	0.78	-0.8
3,554,913	-		PS417_16215	0.78	-0.4
3,555,109	-		PS417_16215	0.90	-2.0
3,555,262	-				-0.4
3,555,273	+				-0.5
3,555,282	+				-0.2
3,555,283	-				+0.5
3,555,291	+				-0.8
3,555,292	-				-0.6
3,555,310	+				-1.4
3,555,422	-		PS417_16220	0.36	-1.5
3,555,681	+				+0.0
3,555,681	+				-0.3
3,556,043	+		PS417_16225	0.54	+0.4
3,556,043	+		PS417_16225	0.54	+0.5
3,556,044	-		PS417_16225	0.55	+0.6
3,556,198	+		PS417_16225	0.74	+1.5
3,556,198	+		PS417_16225	0.74	-0.2
3,556,198	+		PS417_16225	0.74	+0.1
3,556,199	-		PS417_16225	0.74	+1.0
3,556,199	-		PS417_16225	0.74	+0.8
3,556,202	+		PS417_16225	0.74	-0.8
3,556,202	+		PS417_16225	0.74	-0.5
3,556,203	-		PS417_16225	0.74	-0.2
3,556,205	+		PS417_16225	0.75	+0.3
3,556,230	-				+1.6
3,556,259	+		PS417_16225	0.81	+0.1