Strain Fitness in Pseudomonas simiae WCS417 around PS417_15480

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,391,313	-		PS417_15475	0.43	+2.5
3,391,336	+		PS417_15475	0.46	+0.6
3,391,337	-		PS417_15475	0.46	+1.1
3,391,405	+		PS417_15475	0.55	+0.3
3,391,405	+		PS417_15475	0.55	+0.3
3,391,406	-		PS417_15475	0.55	+1.4
3,391,517	-		PS417_15475	0.69	+1.2
3,391,555	+		PS417_15475	0.74	+1.0
3,391,555	+		PS417_15475	0.74	-0.3
3,391,609	-		PS417_15475	0.81	-0.1
3,391,763	-				-0.2
3,391,827	-				-1.1
3,392,067	-		PS417_15480	0.12	-2.5
3,392,395	-		PS417_15480	0.54	-1.4
3,392,423	+		PS417_15480	0.57	+0.4
3,392,423	+		PS417_15480	0.57	-1.2
3,392,469	-		PS417_15480	0.63	-1.8
3,392,974	+		PS417_15485	0.33	+0.1
3,392,980	+		PS417_15485	0.34	-2.2
3,392,980	+		PS417_15485	0.34	-0.1
3,392,981	-		PS417_15485	0.34	-2.0
3,393,006	-		PS417_15485	0.38	+1.8
3,393,006	-		PS417_15485	0.38	+0.8
3,393,006	-		PS417_15485	0.38	+1.0
3,393,022	+		PS417_15485	0.40	+0.5
3,393,023	-		PS417_15485	0.41	-0.5
3,393,053	-		PS417_15485	0.45	-0.8
3,393,344	-		PS417_15485	0.88	+0.6
3,393,371	-				-1.4
3,393,574	-		PS417_15490	0.21	-0.1
3,393,727	-		PS417_15490	0.41	-0.6