Strain Fitness in Pseudomonas simiae WCS417 around PS417_00015
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,902 | + | -1.3 | |||
2,902 | + | +0.2 | |||
2,902 | + | -0.0 | |||
2,903 | - | +0.6 | |||
2,903 | - | -0.0 | |||
3,147 | + | PS417_00015 | 0.22 | -0.7 | |
3,148 | - | PS417_00015 | 0.22 | -1.7 | |
3,148 | - | PS417_00015 | 0.22 | -0.7 | |
3,473 | + | PS417_00015 | 0.51 | -0.3 | |
3,473 | + | PS417_00015 | 0.51 | +0.1 | |
3,493 | + | PS417_00015 | 0.53 | -1.4 | |
3,493 | + | PS417_00015 | 0.53 | -0.6 | |
3,495 | + | PS417_00015 | 0.53 | -0.7 | |
3,495 | + | PS417_00015 | 0.53 | -0.7 | |
3,495 | + | PS417_00015 | 0.53 | -0.1 | |
3,684 | + | PS417_00015 | 0.71 | +0.3 | |
3,801 | + | PS417_00015 | 0.81 | -1.8 | |
3,801 | + | PS417_00015 | 0.81 | +0.4 | |
3,801 | + | PS417_00015 | 0.81 | -3.1 | |
3,801 | + | PS417_00015 | 0.81 | -2.1 | |
3,805 | + | PS417_00015 | 0.82 | +0.1 | |
3,878 | + | PS417_00015 | 0.88 | -1.7 | |
3,878 | + | PS417_00015 | 0.88 | +0.2 | |
3,917 | + | +1.4 |
Or see this region's nucleotide sequence