Strain Fitness in Pseudomonas simiae WCS417 around PS417_15300

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,355,446	+		PS417_15295	0.56	-0.5
3,355,569	-		PS417_15295	0.64	-0.0
3,355,831	-		PS417_15295	0.81	+0.4
3,355,889	+		PS417_15295	0.85	-1.0
3,355,994	+				+0.8
3,356,251	+				-0.6
3,356,251	+				-1.6
3,356,314	+				-0.5
3,356,314	+				+0.8
3,356,342	+				+0.3
3,356,342	+				-0.8
3,356,368	+		PS417_15300	0.11	+0.1
3,356,369	-		PS417_15300	0.11	+0.5
3,356,840	+		PS417_15300	0.30	+0.7
3,356,840	+		PS417_15300	0.30	+0.2
3,356,906	+		PS417_15300	0.33	-0.8
3,356,907	-		PS417_15300	0.33	-0.2
3,357,196	+		PS417_15300	0.45	-0.7
3,357,251	+		PS417_15300	0.47	-1.8
3,357,360	-		PS417_15300	0.51	-0.8
3,357,447	+		PS417_15300	0.55	-0.2
3,357,583	-		PS417_15300	0.61	+1.3
3,357,649	+		PS417_15300	0.63	+1.4
3,357,929	+		PS417_15300	0.75	+0.8
3,358,517	-				+0.8
3,358,543	+				+0.5
3,358,544	-				+1.0
3,358,698	+				+2.4
3,358,698	+				-0.2
3,359,158	-				-0.2
3,359,161	+		PS417_15305	0.60	+0.6
3,359,265	+		PS417_15305	0.71	-0.2
3,359,368	+		PS417_15305	0.81	-1.0
3,359,421	+				+0.8
3,359,422	-		PS417_15305	0.86	-2.4