Strain Fitness in Pseudomonas simiae WCS417 around PS417_15110

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,303,712	+		PS417_15105	0.55	-1.6
3,303,790	-		PS417_15105	0.59	-4.8
3,303,841	-		PS417_15105	0.62	-0.2
3,303,930	+		PS417_15105	0.67	-3.5
3,303,931	-		PS417_15105	0.67	-0.8
3,303,931	-		PS417_15105	0.67	-1.2
3,303,972	+		PS417_15105	0.70	-3.7
3,303,982	-		PS417_15105	0.70	-3.6
3,304,815	-		PS417_15110	0.20	-1.9
3,304,922	+		PS417_15110	0.26	-3.0
3,304,922	+		PS417_15110	0.26	-4.4
3,304,923	-		PS417_15110	0.26	-3.7
3,305,105	+		PS417_15110	0.37	-3.6
3,305,578	-		PS417_15110	0.66	-2.4
3,305,578	-		PS417_15110	0.66	-1.6
3,305,860	+		PS417_15110	0.83	-2.4
3,306,005	+				-0.8
3,306,069	+				-4.5
3,306,070	-				-3.0
3,306,131	+				+0.7
3,306,131	+				+2.6
3,306,194	-				+0.5
3,306,212	+				-0.2
3,306,212	+				-0.4
3,306,422	-		PS417_15115	0.15	+0.1
3,306,704	-		PS417_15115	0.38	+0.7
3,306,704	-		PS417_15115	0.38	-2.0