Strain Fitness in Pseudomonas simiae WCS417 around PS417_14030

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,081,261	+		PS417_14020	0.83	+0.1
3,081,261	+		PS417_14020	0.83	+0.5
3,081,262	+		PS417_14020	0.83	-0.1
3,081,262	-		PS417_14020	0.83	-1.0
3,081,262	-		PS417_14020	0.83	-0.9
3,081,266	-				-0.2
3,081,281	+				-0.8
3,081,425	+				+1.5
3,081,425	+				+1.0
3,081,593	+				-0.6
3,081,652	+				-0.2
3,081,653	-				-1.4
3,081,669	-				-2.6
3,081,715	+				-1.7
3,082,154	-				+0.6
3,082,199	-				-0.7
3,082,199	-				+0.6
3,082,392	-		PS417_14030	0.36	-1.3
3,082,485	-		PS417_14030	0.54	+0.2
3,082,490	+		PS417_14030	0.55	-0.9
3,082,491	-		PS417_14030	0.55	-1.1
3,082,719	-				-1.4
3,083,053	+		PS417_14035	0.24	-0.4
3,083,053	+		PS417_14035	0.24	-0.7
3,083,120	-		PS417_14035	0.36	-0.2
3,083,173	-		PS417_14035	0.47	-1.1
3,083,262	+				-2.0
3,083,265	+		PS417_14035	0.64	+1.5
3,083,296	-		PS417_14035	0.70	-0.2
3,083,296	-		PS417_14035	0.70	-0.2
3,083,430	+				-0.9
3,083,503	-				-0.1
3,083,589	+				+0.1