Strain Fitness in Pseudomonas simiae WCS417 around PS417_13820

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
3,034,327	-		PS417_13805	0.86	-2.8
3,034,391	+		PS417_13805	0.89	-1.9
3,034,427	+				-1.3
3,034,516	-				-2.6
3,034,905	+				+1.4
3,034,906	-				-2.6
3,035,253	-		PS417_13815	0.86	-1.4
3,035,259	+		PS417_13815	0.88	+2.1
3,035,283	+				-2.8
3,035,283	+				-2.3
3,035,317	+				-1.3
3,035,318	-				-2.8
3,035,332	-				-0.1
3,035,332	-				-1.6
3,035,596	-		PS417_13820	0.21	+0.2
3,035,596	-		PS417_13820	0.21	-1.7
3,035,865	+		PS417_13820	0.41	-3.3
3,035,866	-		PS417_13820	0.41	-1.6
3,035,866	-		PS417_13820	0.41	-1.5
3,036,072	+		PS417_13820	0.56	-2.6
3,036,402	+		PS417_13820	0.80	-3.6
3,036,402	+		PS417_13820	0.80	-0.6
3,036,403	-		PS417_13820	0.80	-2.5
3,036,403	-				-0.2
3,036,568	-				-3.0
3,036,682	-				-0.7
3,036,682	-				-1.8
3,036,682	-				-3.6
3,036,873	+		PS417_13825	0.11	-0.6
3,036,873	+		PS417_13825	0.11	-1.1
3,036,895	-		PS417_13825	0.13	-1.2
3,037,029	+		PS417_13825	0.21	-1.1
3,037,184	+		PS417_13825	0.31	+0.1
3,037,278	+		PS417_13825	0.36	+0.1
3,037,282	-		PS417_13825	0.37	-0.5
3,037,470	+		PS417_13825	0.48	-0.2
3,037,471	-		PS417_13825	0.48	-0.4
3,037,473	+		PS417_13825	0.48	-2.9
3,037,497	+		PS417_13825	0.50	-1.8
3,037,498	-		PS417_13825	0.50	-0.8
3,037,498	-		PS417_13825	0.50	-1.0
3,037,660	+		PS417_13825	0.60	-0.2
3,037,660	+		PS417_13825	0.60	-2.4
3,037,660	+		PS417_13825	0.60	-0.8