Strain Fitness in Pseudomonas simiae WCS417 around PS417_13620
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,998,332 | + | PS417_13615 | 0.72 | -1.2 | |
2,998,649 | + | -0.5 | |||
2,998,863 | + | PS417_13620 | 0.18 | -0.2 | |
2,998,864 | - | PS417_13620 | 0.19 | -2.1 | |
2,999,357 | - | -0.9 | |||
2,999,622 | + | -0.1 | |||
2,999,622 | + | -1.5 | |||
2,999,623 | - | +0.2 | |||
2,999,679 | + | PS417_13625 | 0.15 | +0.5 | |
2,999,680 | - | PS417_13625 | 0.16 | -0.2 | |
2,999,867 | + | PS417_13625 | 0.50 | +1.8 | |
2,999,868 | - | PS417_13625 | 0.50 | -1.8 | |
2,999,883 | + | PS417_13625 | 0.53 | +0.1 | |
2,999,884 | - | PS417_13625 | 0.53 | +0.8 | |
3,000,217 | + | -0.0 | |||
3,000,218 | - | +0.1 |
Or see this region's nucleotide sequence