Strain Fitness in Pseudomonas simiae WCS417 around PS417_13400

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,946,497	-		PS417_13395	0.52	+5.2
2,946,617	-		PS417_13395	0.59	+5.9
2,946,637	+		PS417_13395	0.61	+4.6
2,946,746	-		PS417_13395	0.67	+5.3
2,946,944	-		PS417_13395	0.79	+3.1
2,947,189	+				+5.8
2,947,189	+				+5.0
2,947,190	-				+6.1
2,947,190	-				+5.1
2,947,190	-				+6.0
2,947,190	-				+5.8
2,947,190	-				+5.1
2,947,190	-				+6.0
2,947,190	-				+5.2
2,947,198	+				+5.5
2,947,199	-				+5.7
2,947,199	-				+4.2
2,947,199	-				+4.1
2,947,283	-				+0.8
2,947,283	-				-1.5
2,947,296	+				+0.1
2,947,490	-		PS417_13400	0.20	+0.6
2,947,736	-		PS417_13400	0.55	+2.7
2,947,776	+		PS417_13400	0.61	-0.7
2,947,776	+		PS417_13400	0.61	-1.4
2,947,777	-		PS417_13400	0.61	-0.6
2,947,777	-		PS417_13400	0.61	+0.6
2,947,846	+		PS417_13400	0.71	-2.0
2,947,846	+		PS417_13400	0.71	+1.4
2,947,847	-		PS417_13400	0.71	-0.1
2,947,847	-		PS417_13400	0.71	+1.4
2,947,905	-		PS417_13400	0.80	-3.3
2,948,068	+				+0.8
2,948,448	-				-0.6
2,948,448	-				-0.2
2,948,465	-				-1.8