Strain Fitness in Pseudomonas simiae WCS417 around PS417_13265

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,905,827	-		PS417_13260	0.83	+2.6
2,905,846	+		PS417_13260	0.83	-0.9
2,906,285	-				-0.0
2,907,954	-		PS417_13265	0.18	-0.2
2,907,954	-		PS417_13265	0.18	+0.6
2,908,103	+		PS417_13265	0.20	+0.2
2,908,103	+		PS417_13265	0.20	-1.2
2,908,103	+		PS417_13265	0.20	+0.4
2,908,112	+		PS417_13265	0.20	-0.8
2,908,112	+		PS417_13265	0.20	-0.2
2,908,328	-		PS417_13265	0.24	-0.2
2,908,445	+		PS417_13265	0.26	-0.5
2,908,446	-		PS417_13265	0.26	-0.1
2,909,015	+		PS417_13265	0.34	-0.1
2,909,016	-		PS417_13265	0.34	-2.2
2,909,037	+		PS417_13265	0.35	+7.1
2,909,038	-		PS417_13265	0.35	+7.4
2,909,050	+		PS417_13265	0.35	+0.8
2,909,051	-		PS417_13265	0.35	+0.8
2,909,107	+		PS417_13265	0.36	-0.4
2,909,517	+				-0.8
2,909,517	+		PS417_13265	0.42	-0.2
2,909,518	-		PS417_13265	0.42	+1.7
2,909,765	+		PS417_13265	0.46	-0.0
2,909,775	-		PS417_13265	0.46	-2.1
2,909,932	-		PS417_13265	0.49	-0.0
2,910,078	+		PS417_13265	0.51	-0.1
2,910,188	-		PS417_13265	0.53	-2.2
2,910,207	+		PS417_13265	0.53	-1.8
2,910,208	-		PS417_13265	0.53	-1.4
2,910,263	+		PS417_13265	0.54	-1.1
2,910,335	-		PS417_13265	0.55	-0.2
2,911,198	-		PS417_13265	0.68	+2.3
2,911,208	+		PS417_13265	0.69	-0.2
2,911,209	-		PS417_13265	0.69	+0.6
2,911,213	+		PS417_13265	0.69	+0.6
2,911,352	+		PS417_13265	0.71	+0.8
2,911,352	+		PS417_13265	0.71	-1.0
2,911,352	+		PS417_13265	0.71	-0.0
2,911,353	-		PS417_13265	0.71	-1.2
2,911,874	-		PS417_13265	0.79	-0.8
2,911,917	-		PS417_13265	0.80	-1.8
2,911,917	-		PS417_13265	0.80	-0.3
2,912,162	-		PS417_13265	0.83	+0.1
2,912,862	-				-0.6
2,913,196	+				-0.6
2,913,196	+				-1.0
2,913,197	-				+0.1
2,913,623	+		PS417_13270	0.12	-0.0
2,913,624	-		PS417_13270	0.12	-1.3
2,913,624	-		PS417_13270	0.12	-2.2
2,913,730	-		PS417_13270	0.24	+0.4
2,913,750	+		PS417_13270	0.26	+0.1
2,913,751	-				+0.8
2,913,936	-		PS417_13270	0.47	+2.0
2,914,042	+		PS417_13270	0.59	-0.1
2,914,043	-		PS417_13270	0.59	-0.3