Strain Fitness in Pseudomonas simiae WCS417 around PS417_12540

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,726,805	+				+0.3
2,726,904	-				-1.3
2,726,904	-				+0.3
2,727,049	+		PS417_12535	0.24	+0.4
2,727,353	+		PS417_12535	0.57	-0.2
2,727,353	+		PS417_12535	0.57	+0.6
2,727,657	-				+0.7
2,727,657	-				+0.8
2,727,734	+				+0.1
2,727,734	+				-0.2
2,727,882	+		PS417_12540	0.20	-0.2
2,727,883	-		PS417_12540	0.21	+0.3
2,728,068	+		PS417_12540	0.61	-0.5
2,728,253	+				-0.1
2,728,253	+				-0.9
2,728,253	+				+0.3
2,728,254	-				+0.2
2,728,254	-				-1.2
2,728,254	-				-2.2
2,728,263	+				+1.1
2,728,263	+				-1.5
2,728,338	-				+0.2
2,728,668	+		PS417_12545	0.28	-1.2
2,728,811	-		PS417_12545	0.38	+0.7
2,728,811	-		PS417_12545	0.38	-1.0
2,728,812	+		PS417_12545	0.39	-0.1
2,728,813	-		PS417_12545	0.39	-0.0
2,728,813	-		PS417_12545	0.39	-1.6
2,729,109	-		PS417_12545	0.59	+0.2
2,729,129	-		PS417_12545	0.61	-2.0
2,729,132	-		PS417_12545	0.61	+2.0