Strain Fitness in Pseudomonas simiae WCS417 around PS417_12380

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,691,909	-				-0.5
2,692,438	+		PS417_12375	0.57	+0.0
2,692,438	+		PS417_12375	0.57	-0.6
2,692,760	+		PS417_12375	0.90	-0.5
2,692,871	+				+0.5
2,692,874	+				+1.8
2,692,874	+				+0.6
2,692,875	-				+0.8
2,692,926	+				-0.5
2,692,927	-				+0.1
2,693,015	-		PS417_12380	0.18	-0.2
2,693,142	+		PS417_12380	0.33	+0.0
2,693,142	+		PS417_12380	0.33	-0.6
2,693,143	-				+0.8
2,693,145	+		PS417_12380	0.33	-0.3
2,693,145	+		PS417_12380	0.33	-1.9
2,693,145	+		PS417_12380	0.33	-1.8
2,693,146	-		PS417_12380	0.33	-0.9
2,693,146	-		PS417_12380	0.33	-0.2
2,693,432	-		PS417_12380	0.66	+0.3
2,693,440	+		PS417_12380	0.67	-0.8
2,693,738	+				+0.5
2,693,739	-				+0.5
2,693,784	+		PS417_12385	0.17	-0.0
2,694,195	-		PS417_12390	0.24	-0.8
2,694,264	-		PS417_12390	0.32	+1.2
2,694,678	-		PS417_12390	0.82	+0.5