Strain Fitness in Pseudomonas simiae WCS417 around PS417_11900

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,591,300	+		PS417_11895	0.48	+0.9
2,591,300	+		PS417_11895	0.48	-2.1
2,591,300	+		PS417_11895	0.48	+0.2
2,591,301	-		PS417_11895	0.48	-0.0
2,591,339	+		PS417_11895	0.52	+0.1
2,591,404	+		PS417_11895	0.59	+0.8
2,591,435	+		PS417_11895	0.62	+0.2
2,591,436	-		PS417_11895	0.62	+1.1
2,591,436	-		PS417_11895	0.62	-0.2
2,591,436	-		PS417_11895	0.62	+2.7
2,591,436	-		PS417_11895	0.62	+0.7
2,591,436	-		PS417_11895	0.62	+1.0
2,591,441	+		PS417_11895	0.62	-0.0
2,591,441	+		PS417_11895	0.62	-0.2
2,591,441	+		PS417_11895	0.62	-0.5
2,591,442	-		PS417_11895	0.62	-0.7
2,591,442	-		PS417_11895	0.62	+0.6
2,591,442	-		PS417_11895	0.62	+1.2
2,591,513	+		PS417_11895	0.69	-0.7
2,591,514	-		PS417_11895	0.69	+1.1
2,591,741	+				-1.6
2,591,742	-				+0.1
2,591,742	-				-0.1
2,591,889	-				-2.5
2,591,889	-				-2.1
2,591,914	-				+0.0
2,591,984	+				+1.1
2,591,984	+				-0.6
2,591,984	+				+0.9
2,591,985	-				+0.1
2,591,985	-				-1.0
2,591,985	-				-0.1
2,591,985	-				+0.2
2,591,985	-				-2.1
2,591,985	-				-0.7
2,591,985	-				-0.3
2,591,985	-				-0.1
2,591,985	-				-2.1
2,591,986	+				+0.5
2,591,987	-				+0.1
2,591,987	-				-0.3
2,591,988	+				+0.3
2,591,988	+				+1.1
2,591,989	-				-1.6
2,591,989	-				-0.4
2,591,989	-				-1.1
2,591,989	-				-0.1
2,591,989	-				-0.3
2,591,989	-				-1.7
2,592,015	-				+0.9
2,592,017	-				-1.9
2,592,121	-				-2.6
2,592,290	+				-1.7
2,592,290	+				-1.6
2,592,290	+				-0.1
2,592,290	+				-2.1
2,592,291	-				-2.0
2,592,291	-				-4.0
2,592,291	-				-1.9
2,592,442	+		PS417_11900	0.47	-2.4
2,592,511	+		PS417_11900	0.64	-0.2
2,592,512	-		PS417_11900	0.64	-2.5
2,592,596	+		PS417_11900	0.85	-1.9
2,592,597	-		PS417_11900	0.85	-1.7
2,592,741	-				-0.6
2,592,775	+				-0.4
2,592,775	+				-0.1
2,592,960	-				-0.3
2,593,079	+		PS417_11905	0.15	-0.1
2,593,079	+		PS417_11905	0.15	-0.1
2,593,080	-		PS417_11905	0.15	+1.0
2,593,198	-		PS417_11905	0.23	-0.5
2,593,653	+		PS417_11905	0.51	+1.7