Strain Fitness in Pseudomonas simiae WCS417 around PS417_11880

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,586,174	+		PS417_11875	0.48	-1.5
2,586,174	+		PS417_11875	0.48	+0.1
2,586,175	-		PS417_11875	0.48	+1.5
2,586,249	+		PS417_11875	0.56	+1.3
2,586,249	+		PS417_11875	0.56	+0.4
2,586,249	+		PS417_11875	0.56	-2.6
2,586,381	+		PS417_11875	0.69	+1.9
2,586,522	+		PS417_11875	0.83	-0.3
2,586,626	+				-0.3
2,586,626	+				-1.3
2,586,627	-				-0.7
2,586,687	+				+0.1
2,586,775	-				+0.3
2,586,846	+				-0.0
2,587,413	+		PS417_11880	0.55	-3.1
2,587,431	-		PS417_11880	0.56	-1.5
2,587,739	+		PS417_11880	0.86	-0.7
2,587,793	+				-0.7
2,587,793	+				-0.9
2,587,793	+				-0.5
2,587,793	+				-1.1
2,587,816	+				-0.6
2,587,816	+				+0.1
2,587,818	+				-3.7
2,587,819	-				+0.1
2,587,938	+				+0.0
2,587,938	+				+0.3
2,587,943	+				+0.0
2,587,944	-				+1.9
2,588,097	+				+1.6
2,588,098	-				+3.2
2,588,353	+		PS417_11885	0.13	-2.0
2,588,665	+		PS417_11885	0.47	+0.1
2,588,666	-		PS417_11885	0.47	-0.8
2,588,666	-		PS417_11885	0.47	-0.6
2,588,666	-		PS417_11885	0.47	-0.0
2,588,745	+		PS417_11885	0.55	-1.5