Strain Fitness in Pseudomonas simiae WCS417 around PS417_11865

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,581,883	+				-2.7
2,581,883	+				-0.3
2,581,883	+				-0.3
2,581,883	+				+0.4
2,581,883	+				-2.2
2,581,884	-				+2.2
2,581,884	-				+1.2
2,581,884	-				-0.7
2,581,884	-				-0.1
2,581,885	+				+1.3
2,581,885	+				-0.3
2,581,885	+				-0.5
2,581,885	+				-0.6
2,581,885	+				-2.8
2,581,885	+				+0.4
2,581,885	+				-0.3
2,581,886	-				+0.7
2,581,886	-				+0.1
2,581,886	-				+0.4
2,581,886	-				-0.9
2,581,886	-				+1.5
2,581,886	-				-1.7
2,581,886	-				-0.7
2,581,889	+				+0.3
2,581,890	-				+1.0
2,581,890	-				-0.5
2,582,015	+				+0.1
2,582,016	-				+1.1
2,582,242	-		PS417_11860	0.38	+0.3
2,582,406	+		PS417_11860	0.58	-0.3
2,582,407	-		PS417_11860	0.58	+0.4
2,582,411	-		PS417_11860	0.59	-0.8
2,582,496	-		PS417_11860	0.70	+1.7
2,582,651	+		PS417_11860	0.89	+0.8
2,582,652	-		PS417_11860	0.89	+1.5
2,582,652	-				+0.9
2,582,652	-		PS417_11860	0.89	+2.0
2,582,776	+				+0.4
2,583,034	-		PS417_11865	0.33	+0.9
2,583,350	+		PS417_11865	0.71	-0.7
2,583,351	-		PS417_11865	0.72	+0.5
2,583,351	-		PS417_11865	0.72	+0.3
2,583,648	+				+1.3
2,583,649	-				+0.5
2,583,649	-				+0.5
2,583,720	+				+1.1
2,583,721	-				-0.2
2,583,791	+				-0.8
2,583,792	-				-1.8
2,583,792	-				+0.0
2,583,792	-				+1.1
2,583,986	+		PS417_11870	0.13	+0.3
2,583,987	-		PS417_11870	0.13	+0.5