Strain Fitness in Pseudomonas simiae WCS417 around PS417_11750

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,554,315	+		PS417_11740	0.87	+0.2
2,554,330	+				-0.5
2,554,764	+		PS417_11745	0.47	+0.2
2,554,764	+				-0.1
2,554,992	+				+0.4
2,554,992	+				-0.0
2,555,053	+				+0.4
2,555,053	+				-2.3
2,555,053	+				-0.8
2,555,054	-				-0.4
2,555,054	-				-1.1
2,555,069	-				+0.6
2,555,127	+				+0.6
2,555,222	-		PS417_11750	0.10	-0.7
2,555,236	+		PS417_11750	0.11	+1.4
2,555,237	-		PS417_11750	0.11	-0.2
2,555,284	+		PS417_11750	0.13	-0.4
2,555,293	+		PS417_11750	0.14	-0.3
2,555,293	+		PS417_11750	0.14	-1.0
2,555,294	-		PS417_11750	0.14	+1.8
2,555,342	-		PS417_11750	0.16	+1.6
2,555,473	+		PS417_11750	0.22	-0.1
2,555,473	+		PS417_11750	0.22	+0.9
2,555,473	+		PS417_11750	0.22	-0.3
2,555,474	-		PS417_11750	0.22	-1.8
2,555,474	-		PS417_11750	0.22	-1.1
2,555,474	-		PS417_11750	0.22	+0.3
2,555,506	+		PS417_11750	0.23	-0.5
2,555,513	-		PS417_11750	0.24	-2.3
2,555,671	+		PS417_11750	0.31	-0.7
2,555,681	-		PS417_11750	0.32	-0.3
2,555,681	-		PS417_11750	0.32	+1.3
2,555,707	+		PS417_11750	0.33	+0.1
2,555,737	+		PS417_11750	0.34	+0.3
2,555,738	-		PS417_11750	0.34	-0.4
2,555,934	+		PS417_11750	0.43	+0.3
2,556,149	-		PS417_11750	0.53	-0.7
2,556,211	+		PS417_11750	0.56	-0.2
2,556,212	-		PS417_11750	0.56	+0.9
2,556,676	+		PS417_11750	0.77	+0.5
2,556,676	+		PS417_11750	0.77	-0.5
2,556,676	+		PS417_11750	0.77	-2.1
2,556,677	-		PS417_11750	0.78	-1.5
2,556,677	-				-1.1
2,556,704	+		PS417_11750	0.79	-1.3
2,556,806	-		PS417_11750	0.83	-0.8
2,556,854	-		PS417_11750	0.86	-2.2
2,556,872	-		PS417_11750	0.87	-0.3
2,557,206	-				+0.0
2,557,211	+				+0.2
2,557,211	+				+0.5
2,557,211	+				+0.0
2,557,211	+				-0.2
2,557,212	-				-0.1
2,557,212	-				-0.7
2,557,212	-				+0.2
2,557,321	-				+0.3
2,557,321	-				-1.9
2,557,696	+		PS417_11755	0.44	-1.1
2,557,916	-		PS417_11755	0.72	-0.4
2,557,929	-		PS417_11755	0.73	+0.9
2,557,929	-				+0.9
2,557,998	+		PS417_11755	0.82	+1.5
2,557,999	-		PS417_11755	0.82	-0.2