Strain Fitness in Pseudomonas simiae WCS417 around PS417_11380
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,450,130 | - | PS417_11370 | 0.81 | +1.3 | |
2,450,248 | - | +0.1 | |||
2,450,438 | + | PS417_11375 | 0.39 | -0.4 | |
2,450,438 | + | PS417_11375 | 0.39 | -0.8 | |
2,450,439 | - | PS417_11375 | 0.39 | -1.1 | |
2,451,097 | + | PS417_11380 | 0.40 | -1.7 | |
2,451,098 | - | PS417_11380 | 0.41 | -0.2 | |
2,451,098 | - | PS417_11380 | 0.41 | -1.7 | |
2,451,200 | - | PS417_11380 | 0.51 | -0.6 | |
2,451,880 | - | PS417_11385 | 0.17 | -1.0 | |
2,452,355 | - | PS417_11385 | 0.66 | -1.1 |
Or see this region's nucleotide sequence