Strain Fitness in Pseudomonas simiae WCS417 around PS417_10955

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,343,329	+		PS417_10950	0.22	+0.7
2,343,329	+		PS417_10950	0.22	-0.7
2,343,383	+		PS417_10950	0.27	+0.6
2,343,383	+		PS417_10950	0.27	+0.1
2,343,383	+		PS417_10950	0.27	+1.2
2,343,384	-		PS417_10950	0.27	+0.1
2,343,384	-		PS417_10950	0.27	+1.0
2,343,404	+		PS417_10950	0.29	+1.1
2,343,405	-		PS417_10950	0.29	-1.5
2,343,405	-		PS417_10950	0.29	-1.4
2,343,625	+		PS417_10950	0.48	-0.3
2,343,625	+		PS417_10950	0.48	+0.2
2,343,625	+		PS417_10950	0.48	+0.5
2,343,626	-		PS417_10950	0.48	-0.2
2,343,822	+		PS417_10950	0.64	+0.2
2,343,823	-		PS417_10950	0.64	-0.5
2,344,173	-				-0.9
2,344,238	+				-0.5
2,344,239	-				-0.2
2,344,319	+				+0.3
2,344,319	+				-0.9
2,344,319	+				+1.2
2,344,547	+		PS417_10955	0.24	-0.6
2,344,724	+		PS417_10955	0.38	-3.4
2,344,727	+		PS417_10955	0.39	-1.1
2,344,728	-		PS417_10955	0.39	-2.0
2,344,743	-		PS417_10955	0.40	+0.3
2,344,772	+		PS417_10955	0.42	-1.2
2,345,126	+		PS417_10955	0.70	-1.4
2,345,586	-				-0.0
2,345,636	+				+0.8
2,345,636	+				+0.1
2,345,637	-				-0.1
2,345,664	-				+0.5
2,345,664	-				+0.1
2,345,747	+				-0.6
2,346,127	-		PS417_10960	0.24	+0.4
2,346,447	-		PS417_10960	0.37	+0.5
2,346,447	-		PS417_10960	0.37	+0.1