Strain Fitness in Pseudomonas simiae WCS417 around PS417_10740

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,294,307	+		PS417_10730	0.76	-0.6
2,294,307	+		PS417_10730	0.76	-1.0
2,294,308	-		PS417_10730	0.76	-0.6
2,294,542	+				-0.3
2,294,542	+				+2.5
2,294,542	+				+2.0
2,294,542	+				-0.4
2,294,542	+				+0.5
2,294,571	-				-2.7
2,294,657	+				+0.6
2,294,658	-				-0.3
2,294,741	+				-0.7
2,294,742	-				+1.5
2,294,742	-				-0.1
2,294,757	-		PS417_10735	0.11	+0.6
2,294,874	+		PS417_10735	0.34	+0.2
2,294,874	+		PS417_10735	0.34	+0.9
2,294,898	-		PS417_10735	0.38	+0.2
2,294,901	+		PS417_10735	0.39	+0.2
2,294,902	-		PS417_10735	0.39	+0.9
2,295,081	-		PS417_10735	0.73	+1.6
2,295,085	-		PS417_10735	0.73	-0.6
2,295,096	-		PS417_10735	0.76	+0.0
2,295,223	-				+0.3
2,295,293	+				+0.0
2,295,294	-				-0.1
2,295,357	+		PS417_10740	0.27	-1.8
2,295,363	+		PS417_10740	0.30	-0.4
2,295,364	-				+1.0
2,295,364	-		PS417_10740	0.30	-2.6
2,295,364	-		PS417_10740	0.30	-0.3
2,295,364	-		PS417_10740	0.30	-0.4
2,295,364	-		PS417_10740	0.30	-1.0
2,295,364	-		PS417_10740	0.30	+1.0
2,295,387	-				-0.0
2,295,387	-		PS417_10740	0.41	-4.0
2,295,508	+				-2.4
2,295,508	+				+0.1
2,295,509	-				-0.1
2,295,509	-				-3.5
2,295,509	-				+0.8
2,295,593	+		PS417_10745	0.11	+0.5
2,295,593	+		PS417_10745	0.11	-0.7
2,295,593	+		PS417_10745	0.11	-1.4
2,295,594	-		PS417_10745	0.11	+0.2
2,295,642	+		PS417_10745	0.18	+1.2
2,295,642	+		PS417_10745	0.18	+0.1
2,295,642	+		PS417_10745	0.18	-0.1
2,295,713	+		PS417_10745	0.29	-0.3
2,295,713	+		PS417_10745	0.29	-0.6
2,295,750	+		PS417_10745	0.34	-2.1
2,295,750	+		PS417_10745	0.34	-0.8
2,295,751	-		PS417_10745	0.35	+0.0
2,295,835	+		PS417_10745	0.47	-0.6
2,295,835	+		PS417_10745	0.47	+0.4
2,295,836	-				-0.0
2,295,869	+		PS417_10745	0.52	-0.3
2,295,869	+		PS417_10745	0.52	+0.3
2,295,870	-				+2.0
2,296,092	+		PS417_10745	0.85	-1.5
2,296,092	+		PS417_10745	0.85	+1.0
2,296,092	+		PS417_10745	0.85	-0.9
2,296,093	-		PS417_10745	0.85	+0.2
2,296,093	-		PS417_10745	0.85	+0.1
2,296,093	-		PS417_10745	0.85	-1.7
2,296,184	-				+0.9
2,296,223	+				+0.2
2,296,321	-				-1.0
2,296,321	-				+0.1
2,296,364	+		PS417_10750	0.14	-0.0
2,296,364	+		PS417_10750	0.14	+0.7
2,296,364	+		PS417_10750	0.14	+1.0
2,296,364	+		PS417_10750	0.14	+0.1
2,296,365	-		PS417_10750	0.14	+0.8
2,296,408	+		PS417_10750	0.28	-0.0