Strain Fitness in Pseudomonas simiae WCS417 around PS417_10490

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,238,399	+				-0.8
2,238,399	+				+0.2
2,238,925	+		PS417_10485	0.62	-0.0
2,238,925	+		PS417_10485	0.62	-0.0
2,238,925	+		PS417_10485	0.62	-0.2
2,239,125	+		PS417_10485	0.85	-0.9
2,239,125	+		PS417_10485	0.85	-0.3
2,239,126	-		PS417_10485	0.86	+0.2
2,239,126	-		PS417_10485	0.86	-1.6
2,239,126	-		PS417_10485	0.86	-1.0
2,239,321	+				-1.0
2,239,322	-				-0.3
2,239,527	+		PS417_10490	0.17	-2.6
2,239,527	+		PS417_10490	0.17	+2.4
2,239,527	+		PS417_10490	0.17	+0.4
2,239,572	-		PS417_10490	0.21	-0.0
2,239,852	+		PS417_10490	0.50	+0.2
2,240,336	+				-0.4
2,240,336	+				+0.5
2,240,336	+				+0.5
2,240,336	+				+0.6
2,240,502	-		PS417_10495	0.18	+0.0
2,240,520	+		PS417_10495	0.21	-0.6
2,240,520	+		PS417_10495	0.21	-2.3
2,240,521	-		PS417_10495	0.21	-0.1
2,240,521	-				-1.3
2,240,647	+		PS417_10495	0.41	-1.0
2,240,754	+		PS417_10495	0.59	+0.4
2,240,755	-		PS417_10495	0.59	+1.0
2,240,755	-				+1.0
2,240,755	-		PS417_10495	0.59	+2.0
2,240,763	+		PS417_10495	0.60	-0.1
2,240,764	-		PS417_10495	0.60	+0.8
2,240,773	-		PS417_10495	0.62	+0.9
2,240,787	+		PS417_10495	0.64	-0.1
2,240,943	-		PS417_10495	0.89	-1.2
2,240,943	-		PS417_10495	0.89	+0.8
2,241,026	-				-0.0
2,241,100	-				-2.2
2,241,158	+				-0.5
2,241,158	+				-0.1
2,241,158	+				+0.4
2,241,327	-		PS417_10500	0.16	-0.7
2,241,327	-		PS417_10500	0.16	+1.6
2,241,327	-		PS417_10500	0.16	-1.2