Strain Fitness in Pseudomonas simiae WCS417 around PS417_10455

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,231,610	+		PS417_10445	0.40	-0.5
2,231,782	+		PS417_10445	0.59	-1.8
2,232,224	+				-0.7
2,232,224	+				-1.8
2,232,224	+				+0.7
2,232,224	+				-0.0
2,232,224	+				-1.8
2,232,224	+				-2.3
2,232,225	-				-0.2
2,232,225	-				-0.7
2,232,225	-				+0.0
2,232,225	-				-0.2
2,232,225	-				+0.2
2,232,225	-				+0.9
2,232,225	-				+0.2
2,232,429	+		PS417_10450	0.57	-0.0
2,232,535	+				-0.4
2,232,565	+				+1.3
2,232,565	+				+1.0
2,232,572	+				+0.1
2,232,766	+		PS417_10455	0.27	-1.7
2,233,229	+		PS417_10455	0.88	+0.7
2,233,230	-		PS417_10455	0.88	-1.7
2,233,230	-		PS417_10455	0.88	-1.9
2,233,482	+				-0.1
2,233,482	+				-0.2
2,233,482	+				-1.3
2,233,685	+		PS417_10460	0.26	-0.4
2,233,685	+		PS417_10460	0.26	-0.4
2,233,685	+		PS417_10460	0.26	+1.2
2,233,685	+		PS417_10460	0.26	-0.0
2,233,685	+		PS417_10460	0.26	-1.3
2,233,685	+		PS417_10460	0.26	+0.2
2,233,686	-		PS417_10460	0.26	-0.1
2,233,686	-		PS417_10460	0.26	-0.6
2,233,686	-		PS417_10460	0.26	-0.8
2,233,686	-		PS417_10460	0.26	-0.2
2,233,686	-		PS417_10460	0.26	-1.7
2,233,892	-		PS417_10460	0.46	+0.4
2,233,931	+		PS417_10460	0.50	+0.0
2,233,931	+		PS417_10460	0.50	-0.1
2,233,931	+		PS417_10460	0.50	+0.3
2,234,029	+		PS417_10460	0.60	+0.8
2,234,198	+		PS417_10460	0.76	-0.9
2,234,199	-		PS417_10460	0.76	-1.0
2,234,199	-		PS417_10460	0.76	+0.1
2,234,215	+		PS417_10460	0.78	-0.0
2,234,216	-		PS417_10460	0.78	+1.0
2,234,249	+		PS417_10460	0.81	+0.4
2,234,285	-		PS417_10460	0.84	+0.1