Strain Fitness in Pseudomonas simiae WCS417 around PS417_10405

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,224,490	+		PS417_10400	0.32	-1.8
2,224,652	+		PS417_10400	0.47	+0.3
2,224,653	-		PS417_10400	0.48	-0.2
2,224,662	-		PS417_10400	0.48	-1.0
2,224,697	-		PS417_10400	0.52	-0.6
2,224,697	-		PS417_10400	0.52	+0.1
2,224,697	-		PS417_10400	0.52	-1.8
2,224,941	-		PS417_10400	0.75	+0.4
2,225,259	+				-0.6
2,225,259	+		PS417_10405	0.29	-1.0
2,225,410	+				+0.3
2,225,428	-				+0.9
2,225,759	+				-0.5
2,225,760	-				-0.0
2,225,760	-				-0.1
2,225,949	+		PS417_10415	0.15	+0.0
2,225,950	-		PS417_10415	0.16	-0.2
2,225,973	+		PS417_10415	0.22	+0.7
2,225,974	-		PS417_10415	0.22	-1.0
2,225,974	-				-0.0
2,225,974	-		PS417_10415	0.22	-1.3
2,225,994	+		PS417_10415	0.27	-1.5
2,225,995	-		PS417_10415	0.28	+0.3
2,226,012	+		PS417_10415	0.32	-0.6
2,226,012	+		PS417_10415	0.32	+0.2
2,226,013	-		PS417_10415	0.33	-0.6
2,226,013	-		PS417_10415	0.33	+0.3
2,226,037	-		PS417_10415	0.39	+0.4
2,226,078	+		PS417_10415	0.50	+0.2
2,226,078	+		PS417_10415	0.50	-0.5
2,226,079	-		PS417_10415	0.50	+0.9
2,226,079	-		PS417_10415	0.50	+0.4
2,226,097	-		PS417_10415	0.55	-0.6
2,226,250	+				-2.6
2,226,250	+				-1.5
2,226,304	-				-1.6
2,226,304	-				+0.4
2,226,313	+				-0.4
2,226,313	+				-1.8
2,226,314	-				+0.5
2,226,333	+				+0.5
2,226,344	-				+1.3