Strain Fitness in Pseudomonas simiae WCS417 around PS417_09765

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,115,130	+		PS417_09755	0.65	-1.1
2,115,182	+		PS417_09755	0.75	+0.6
2,115,251	-		PS417_09755	0.88	-1.0
2,115,251	-		PS417_09755	0.88	-0.6
2,115,253	+		PS417_09755	0.88	+0.1
2,115,254	-		PS417_09755	0.88	-0.6
2,115,258	-				-0.6
2,115,258	-		PS417_09755	0.89	+0.1
2,115,370	+				-0.3
2,115,411	+				-0.3
2,115,411	+				-0.1
2,115,426	-				+1.2
2,115,472	-				+0.4
2,115,519	+				-0.7
2,115,519	+				+2.1
2,115,802	+				+0.2
2,115,946	+				+0.7
2,115,946	+				+1.5
2,115,995	+				+1.0
2,115,995	+				-1.5
2,115,998	-				+0.1
2,116,053	-				+1.2
2,116,359	+		PS417_09765	0.43	+0.7
2,116,592	+		PS417_09765	0.68	+3.6
2,116,713	+		PS417_09765	0.82	+0.4
2,116,713	+		PS417_09765	0.82	+0.2
2,116,713	+				+2.0
2,116,714	-		PS417_09765	0.82	+0.4
2,116,714	-		PS417_09765	0.82	+0.8
2,116,715	+		PS417_09765	0.82	-0.2
2,116,715	+		PS417_09765	0.82	-0.1
2,116,715	+		PS417_09765	0.82	+0.3
2,116,715	+		PS417_09765	0.82	+0.9
2,116,716	-		PS417_09765	0.82	-1.1
2,116,716	-				-1.3
2,116,716	-		PS417_09765	0.82	-0.3
2,116,716	-		PS417_09765	0.82	+0.4
2,116,769	+		PS417_09765	0.88	+1.0
2,116,770	-		PS417_09765	0.88	+0.5
2,116,770	-		PS417_09765	0.88	+1.1
2,116,770	-		PS417_09765	0.88	-0.2
2,116,771	+		PS417_09765	0.88	-1.2
2,116,772	-		PS417_09765	0.88	+0.9
2,116,785	-		PS417_09765	0.90	-0.2
2,116,877	+				-0.4
2,116,878	-				-2.0
2,116,883	-				+1.0
2,117,135	+		PS417_09770	0.17	-0.6
2,117,137	+		PS417_09770	0.17	+0.3
2,117,138	-		PS417_09770	0.17	+0.4
2,117,138	-				-1.3
2,117,172	+		PS417_09770	0.20	-0.4
2,117,231	+		PS417_09770	0.25	-1.1
2,117,231	+		PS417_09770	0.25	-1.2
2,117,360	-		PS417_09770	0.37	-0.6
2,117,360	-		PS417_09770	0.37	-1.3
2,117,360	-		PS417_09770	0.37	+1.0
2,117,723	+		PS417_09770	0.68	-0.5