Strain Fitness in Pseudomonas simiae WCS417 around PS417_09590

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,075,363	+		PS417_09585	0.22	+0.7
2,075,363	+		PS417_09585	0.22	-0.3
2,075,364	-		PS417_09585	0.22	+0.2
2,075,364	-		PS417_09585	0.22	+0.6
2,075,364	-		PS417_09585	0.22	-0.4
2,075,427	-		PS417_09585	0.28	-1.1
2,075,428	+		PS417_09585	0.28	-1.0
2,075,429	-		PS417_09585	0.28	-1.8
2,075,609	+		PS417_09585	0.45	-0.7
2,075,610	-				+0.0
2,075,610	-		PS417_09585	0.45	+1.2
2,075,610	-				+3.3
2,075,610	-		PS417_09585	0.45	+1.6
2,075,939	+		PS417_09585	0.77	+0.4
2,075,939	+		PS417_09585	0.77	+1.0
2,075,944	-		PS417_09585	0.77	+1.4
2,075,944	-		PS417_09585	0.77	-1.3
2,075,944	-		PS417_09585	0.77	-3.1
2,075,944	-		PS417_09585	0.77	+1.0
2,076,219	+				-0.2
2,077,002	-		PS417_09590	0.52	-1.7
2,077,182	+		PS417_09590	0.65	-2.6
2,077,183	-		PS417_09590	0.65	+0.2
2,077,208	+		PS417_09590	0.67	-0.0
2,077,261	+		PS417_09590	0.70	-1.0
2,077,261	+		PS417_09590	0.70	+0.0
2,077,262	-		PS417_09590	0.70	-2.0
2,077,483	-		PS417_09590	0.86	-1.3
2,077,715	-				+0.1
2,077,826	+		PS417_09595	0.10	+0.0
2,077,827	-		PS417_09595	0.10	-1.6
2,077,827	-		PS417_09595	0.10	-2.2
2,077,994	+		PS417_09595	0.22	-0.4
2,077,994	+		PS417_09595	0.22	+0.2
2,077,995	-		PS417_09595	0.22	-1.9
2,077,995	-		PS417_09595	0.22	+0.7
2,078,000	+		PS417_09595	0.23	+1.0
2,078,000	+		PS417_09595	0.23	+0.7
2,078,001	-				-1.6
2,078,187	-		PS417_09595	0.36	-2.0
2,078,244	-		PS417_09595	0.40	+0.1