Strain Fitness in Pseudomonas simiae WCS417 around PS417_09455

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
2,046,569	+		PS417_09450	0.29	+0.5
2,046,570	-		PS417_09450	0.29	-0.8
2,046,660	+		PS417_09450	0.37	-0.7
2,046,660	+		PS417_09450	0.37	+0.0
2,046,661	-		PS417_09450	0.37	+2.3
2,046,661	-		PS417_09450	0.37	+0.1
2,046,661	-		PS417_09450	0.37	+0.3
2,046,726	+		PS417_09450	0.43	+0.5
2,047,277	-				+0.8
2,047,730	+		PS417_09455	0.31	+0.8
2,047,730	+		PS417_09455	0.31	+0.4
2,047,731	-		PS417_09455	0.31	-0.4
2,047,731	-		PS417_09455	0.31	+0.8
2,047,764	+		PS417_09455	0.34	+0.2
2,047,793	+		PS417_09455	0.36	-2.7
2,047,793	+		PS417_09455	0.36	-1.8
2,047,794	-		PS417_09455	0.36	-0.3
2,047,794	-		PS417_09455	0.36	+0.8
2,047,794	-		PS417_09455	0.36	-0.8
2,047,839	+		PS417_09455	0.40	+0.3
2,047,839	+		PS417_09455	0.40	-3.0
2,047,839	+		PS417_09455	0.40	+5.7
2,047,840	-		PS417_09455	0.40	+0.0
2,047,840	-				+1.0
2,047,840	-		PS417_09455	0.40	+0.4
2,047,840	-		PS417_09455	0.40	+0.1
2,047,840	-		PS417_09455	0.40	-1.7
2,047,840	-		PS417_09455	0.40	-2.6
2,048,566	+				-1.8
2,048,577	+				+0.4
2,048,599	+				+0.9
2,048,638	-				-0.1
2,048,749	+		PS417_09460	0.12	-2.3
2,049,184	+		PS417_09460	0.50	+0.0
2,049,184	+		PS417_09460	0.50	+0.1
2,049,339	+				-1.0
2,049,380	-		PS417_09460	0.67	-0.3