Strain Fitness in Pseudomonas simiae WCS417 around PS417_08770

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,907,426	+		PS417_08765	0.52	-0.2
1,907,427	-		PS417_08765	0.52	-2.0
1,907,927	+				+0.0
1,907,927	+				+0.7
1,907,928	-				-0.5
1,907,930	+				+0.7
1,907,930	+				-0.2
1,907,930	+				+0.5
1,907,931	-				+0.4
1,907,931	-				-2.0
1,908,001	-				+1.9
1,908,158	+				-0.6
1,908,158	+				+0.8
1,908,158	+				+0.5
1,908,158	+				-1.3
1,908,159	-				+1.0
1,908,159	-				-1.8
1,908,159	-				-0.3
1,908,159	-				-0.1
1,908,439	-		PS417_08770	0.39	-1.0
1,908,439	-		PS417_08770	0.39	+0.2
1,908,628	-		PS417_08770	0.70	+1.7
1,908,774	-				-1.3
1,908,810	+				-0.2
1,908,889	+				+0.7
1,908,889	+				-1.7
1,908,889	+				-1.0
1,908,944	-				+0.9
1,908,955	+				+1.0
1,909,066	+		PS417_08775	0.12	+0.0
1,909,102	+		PS417_08775	0.16	-0.3
1,909,102	+		PS417_08775	0.16	-0.8
1,909,102	+		PS417_08775	0.16	+0.3
1,909,103	-		PS417_08775	0.16	+0.0
1,909,103	-		PS417_08775	0.16	-1.2
1,909,393	-		PS417_08775	0.45	-0.7
1,909,447	+		PS417_08775	0.50	+0.3
1,909,465	+		PS417_08775	0.52	+0.5
1,909,466	-		PS417_08775	0.52	-0.7
1,909,466	-		PS417_08775	0.52	+0.3
1,909,466	-		PS417_08775	0.52	-0.1
1,909,466	-		PS417_08775	0.52	-0.6