Strain Fitness in Pseudomonas simiae WCS417 around PS417_08245

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,805,673	-				+2.6
1,805,753	-		PS417_08240	0.10	+5.9
1,806,069	+		PS417_08240	0.51	+4.5
1,806,567	+				+0.1
1,806,954	-		PS417_08245	0.50	+6.6
1,807,354	-				+5.6
1,807,367	-				+5.8
1,807,444	+				+6.4
1,807,445	-				+4.0
1,807,552	-				+3.1
1,807,552	-				+1.8
1,807,552	-				+2.2
1,807,552	-				+2.4
1,807,552	-				+2.4
1,807,552	-				+2.1
1,807,558	-				+3.0
1,807,558	-				+1.2
1,807,634	+				+5.4
1,807,692	+				+5.4
1,807,693	-				-0.9
1,807,693	-				+0.6
1,807,693	-				+1.0
1,807,693	-				-3.2
1,807,693	-				-0.6
1,807,693	-				-1.2
1,807,696	+				+5.5
1,807,697	-				-0.2
1,807,697	-				-0.3
1,807,730	-				-0.2
1,807,734	-				+1.7
1,807,736	+				+5.7
1,807,807	+				+6.0
1,807,807	+				+5.8
1,807,823	+				+5.4
1,807,823	+				+4.7
1,807,840	-				-0.0
1,807,840	-				-0.1
1,807,905	+				+2.8
1,807,905	+				+4.7
1,807,905	+				+2.1
1,807,948	+				+3.5
1,807,949	-				+1.0
1,807,949	-				-0.7
1,807,949	-				-0.1
1,807,967	-				-0.4
1,807,967	-				+0.4
1,808,022	+				+3.7
1,808,022	+				+3.1
1,808,022	+				+3.5
1,808,023	-				+0.7
1,808,023	-				+0.4
1,808,023	-				+0.1
1,808,023	-				-0.2
1,808,036	+				+3.5
1,808,066	+		PS417_08250	0.17	+2.7
1,808,266	+		PS417_08250	0.77	+1.2
1,808,267	-		PS417_08250	0.77	+0.1
1,808,340	+				+1.5
1,808,340	+				-0.2
1,808,340	+				+0.8
1,808,341	-				+1.1
1,808,433	-		PS417_08255	0.12	+0.1