Strain Fitness in Pseudomonas simiae WCS417 around PS417_08140
Experiment: Doxycycline hyclate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,782,691 | + | PS417_08135 | 0.63 | -0.2 | |
| 1,782,691 | + | PS417_08135 | 0.63 | +2.4 | |
| 1,782,798 | + | PS417_08135 | 0.67 | +0.4 | |
| 1,782,798 | + | PS417_08135 | 0.67 | +3.0 | |
| 1,782,909 | + | PS417_08135 | 0.72 | -0.4 | |
| 1,782,911 | + | PS417_08135 | 0.73 | +0.4 | |
| 1,782,911 | + | PS417_08135 | 0.73 | +1.4 | |
| 1,782,912 | - | PS417_08135 | 0.73 | +5.0 | |
| 1,783,314 | + | +0.4 | |||
| 1,783,446 | + | +0.0 | |||
| 1,783,467 | + | +0.5 | |||
| 1,783,467 | + | -0.2 | |||
| 1,784,206 | + | -0.9 |
Or see this region's nucleotide sequence