Strain Fitness in Pseudomonas simiae WCS417 around PS417_07370

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,623,178	-		PS417_07365	0.47	+0.3
1,623,230	-		PS417_07365	0.51	+0.4
1,623,496	+				+0.2
1,623,496	+		PS417_07365	0.71	+0.8
1,623,496	+		PS417_07365	0.71	+1.6
1,623,497	-		PS417_07365	0.71	-0.0
1,623,591	+		PS417_07365	0.78	+0.6
1,623,617	-		PS417_07365	0.80	+0.7
1,623,689	+		PS417_07365	0.85	+0.3
1,623,689	+		PS417_07365	0.85	-0.1
1,623,689	+		PS417_07365	0.85	-0.1
1,623,689	+		PS417_07365	0.85	-0.1
1,623,689	+		PS417_07365	0.85	+1.0
1,623,690	-		PS417_07365	0.85	+0.3
1,623,811	+				-0.8
1,623,812	-				-1.8
1,623,880	+				+0.7
1,624,034	+				-0.2
1,624,035	-				+1.3
1,624,035	-				-1.4
1,624,574	+				+0.4
1,624,574	+				+0.0
1,624,575	-				-0.1
1,624,586	-				+0.9
1,624,586	-				+0.3
1,624,596	-				+1.7
1,624,614	+				-0.3
1,624,685	+				+0.3
1,624,685	+				+0.6
1,624,687	+				+1.3
1,624,687	+				-1.2
1,624,688	-				-1.4
1,624,688	-				-2.3
1,624,688	-				-1.2
1,624,688	-				+0.1
1,624,689	+				+1.6
1,624,689	+				+1.5
1,624,689	+				-2.3
1,624,689	+				+0.3
1,624,690	-				+0.2
1,624,690	-				+0.3
1,624,690	-				-1.8
1,624,690	-				-0.3
1,624,690	-				+0.3
1,624,690	-				+0.5
1,624,838	-		PS417_07375	0.10	-0.6
1,624,875	-		PS417_07375	0.14	-2.5
1,625,077	+		PS417_07375	0.31	-3.3
1,625,176	+		PS417_07375	0.40	-1.2
1,625,176	+		PS417_07375	0.40	+1.4
1,625,177	-		PS417_07375	0.40	+0.4
1,625,177	-		PS417_07375	0.40	-1.2
1,625,177	-		PS417_07375	0.40	-1.2
1,625,213	-		PS417_07375	0.43	-1.4
1,625,248	+		PS417_07375	0.47	-0.0
1,625,248	+		PS417_07375	0.47	-0.1
1,625,248	+		PS417_07375	0.47	-1.2
1,625,249	-		PS417_07375	0.47	-0.3
1,625,249	-		PS417_07375	0.47	-0.4
1,625,524	-		PS417_07375	0.71	-0.4
1,625,580	-		PS417_07375	0.76	-1.6