Strain Fitness in Pseudomonas simiae WCS417 around PS417_06390

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,414,603	-				-1.7
1,414,619	-				-0.5
1,414,639	-				+0.4
1,414,639	-				-0.2
1,414,643	-				-0.7
1,414,648	+				+0.1
1,414,648	+				-0.8
1,414,649	-				-1.0
1,414,693	+				-0.6
1,414,699	-				+0.3
1,414,699	-				-0.2
1,414,937	+				-0.3
1,414,938	-				-0.8
1,415,041	+		PS417_06385	0.22	-1.9
1,415,041	+		PS417_06385	0.22	-0.3
1,415,042	-		PS417_06385	0.22	-1.7
1,415,065	+		PS417_06385	0.25	+1.3
1,415,072	+		PS417_06385	0.26	+1.1
1,415,176	+		PS417_06385	0.42	-1.1
1,415,176	+		PS417_06385	0.42	+0.6
1,415,176	+		PS417_06385	0.42	-0.5
1,415,177	-		PS417_06385	0.43	-1.0
1,415,177	-		PS417_06385	0.43	-0.9
1,415,177	-		PS417_06385	0.43	+0.5
1,415,177	-		PS417_06385	0.43	+0.1
1,415,177	-		PS417_06385	0.43	+0.3
1,415,177	-		PS417_06385	0.43	-1.3
1,415,724	+				-0.7
1,415,725	-				-0.3
1,415,725	-				+1.3
1,415,725	-				-1.6
1,415,725	-				+1.8
1,415,748	-				-0.4
1,415,809	+		PS417_06390	0.10	-1.6
1,415,809	+		PS417_06390	0.10	-0.2
1,415,809	+		PS417_06390	0.10	-1.2
1,416,158	-		PS417_06390	0.25	-0.3
1,416,318	+				+1.7
1,416,409	+		PS417_06390	0.35	-0.7
1,416,409	+		PS417_06390	0.35	-0.9
1,416,410	-		PS417_06390	0.35	-0.2
1,416,410	-		PS417_06390	0.35	-0.9
1,416,492	-		PS417_06390	0.38	-0.2
1,416,746	-		PS417_06390	0.48	+1.0
1,416,775	-		PS417_06390	0.49	-0.6
1,416,791	-		PS417_06390	0.50	-1.1
1,416,847	+		PS417_06390	0.52	+0.4
1,416,848	-		PS417_06390	0.52	-0.1
1,417,233	-		PS417_06390	0.68	-2.2
1,417,233	-		PS417_06390	0.68	+0.3
1,417,239	-		PS417_06390	0.68	-0.3
1,417,279	-		PS417_06390	0.70	-1.2
1,417,350	-		PS417_06390	0.73	-1.7
1,417,367	+		PS417_06390	0.73	+1.2
1,417,888	+				-2.2
1,417,888	+				-0.1
1,417,889	-				-0.3
1,417,889	-				-2.7
1,417,954	-				-2.7
1,418,459	-		PS417_06395	0.48	-0.2
1,418,543	+		PS417_06395	0.59	+0.9
1,418,543	+		PS417_06395	0.59	-0.3
1,418,544	-		PS417_06395	0.60	-1.1
1,418,848	+				-0.3
1,418,848	+				-1.0
1,418,848	+				+0.0
1,418,848	+				+0.7
1,418,878	+				-0.4
1,418,879	-				+1.3