Strain Fitness in Pseudomonas simiae WCS417 around PS417_00585

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
116,370	+		PS417_00580	0.20	+0.2
116,503	-		PS417_00580	0.31	-0.0
116,616	+		PS417_00580	0.41	+1.6
116,950	-		PS417_00580	0.69	-2.2
116,950	-		PS417_00580	0.69	+1.1
116,950	-		PS417_00580	0.69	+3.4
117,309	+				-0.2
117,309	+				-0.4
117,309	+				+0.5
117,315	+				+1.2
117,316	-				+0.2
117,520	-		PS417_00585	0.16	+0.4
117,522	+		PS417_00585	0.16	-0.1
117,522	+				+0.6
117,523	-		PS417_00585	0.16	-0.7
117,705	+		PS417_00585	0.31	-1.3
117,759	+		PS417_00585	0.35	-3.4
118,000	-		PS417_00585	0.55	+0.3
118,000	-		PS417_00585	0.55	-1.5
118,125	-		PS417_00585	0.65	-0.4
118,182	-		PS417_00585	0.70	-0.8
118,469	+				-0.8
118,470	-				+0.5
118,492	+				-0.7
118,493	-				-0.5
118,493	-				+0.1
118,541	+				-3.2
118,559	+				-1.3
118,559	+				-0.1
118,560	-				-1.1
118,560	-				-0.6
118,560	-				-0.2
118,560	-				+0.2
118,561	+				-0.1
118,561	+				-1.5
118,563	+				+0.1
118,563	+				+0.7
118,563	+				-3.2
118,564	-				-0.5
118,564	-				-0.1
118,564	-				-0.2
118,564	-				-0.6
118,564	-				-2.1
118,564	-				-1.4
118,564	-				+0.9
118,613	-				-1.2
118,662	-				-0.4
118,662	-				-0.1
118,972	-		PS417_00590	0.10	-0.1
118,972	-		PS417_00590	0.10	+0.7
119,126	-				-0.1
119,133	+				-0.0
119,134	-				-1.2
119,193	-				+0.0
119,193	-				+1.4
119,205	+				-1.7
119,206	-				-0.4
119,206	-				+1.1
119,295	+				-0.7
119,295	+				-2.3
119,296	-				+0.2
119,296	-				+0.3
119,298	-				+0.5
119,303	+				-0.7
119,303	+				+1.3
119,303	+				+0.1
119,304	-				+0.1
119,304	-				+0.1
119,368	+				-2.7
119,439	-				+0.8
119,439	-				-1.5
119,439	-				+0.7
119,439	-				-1.6
119,447	+				-1.9
119,448	-				-0.3
119,547	+				+0.7