Strain Fitness in Pseudomonas simiae WCS417 around PS417_05800

Experiment: Doxycycline hyclate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.001 mg/ml
1,292,563	+		PS417_05790	0.65	+2.4
1,292,867	-				+0.5
1,293,112	+		PS417_05795	0.35	+0.4
1,293,112	+		PS417_05795	0.35	-0.4
1,293,113	-		PS417_05795	0.35	-0.3
1,293,124	+		PS417_05795	0.37	+0.4
1,293,124	+		PS417_05795	0.37	-1.7
1,293,124	+		PS417_05795	0.37	-0.4
1,293,125	-		PS417_05795	0.37	+0.0
1,293,125	-		PS417_05795	0.37	+0.2
1,293,125	-		PS417_05795	0.37	+0.5
1,293,232	+		PS417_05795	0.56	-0.2
1,293,232	+		PS417_05795	0.56	-1.4
1,293,233	-				+1.3
1,293,396	+		PS417_05795	0.86	+0.0
1,293,397	-		PS417_05795	0.86	-2.4
1,293,473	-				-0.3
1,293,496	+		PS417_05800	0.12	-0.6
1,293,496	+		PS417_05800	0.12	-1.4
1,293,496	+		PS417_05800	0.12	-0.0
1,293,496	+		PS417_05800	0.12	-1.9
1,293,496	+		PS417_05800	0.12	-0.5
1,293,497	-		PS417_05800	0.12	-1.4
1,293,526	+		PS417_05800	0.25	-0.1
1,293,689	+				-0.7
1,293,689	+				-1.5
1,293,690	-				+0.8
1,293,699	-				+0.8
1,293,851	+		PS417_05805	0.83	-1.2
1,293,909	+				-1.5
1,293,909	+				+0.5
1,294,164	+		PS417_05810	0.30	+0.3
1,294,164	+		PS417_05810	0.30	+0.8
1,294,164	+		PS417_05810	0.30	-0.1
1,294,174	-		PS417_05810	0.32	+1.6
1,294,366	+		PS417_05810	0.70	+0.1
1,294,366	+		PS417_05810	0.70	+0.7
1,294,366	+		PS417_05810	0.70	+0.9
1,294,366	+		PS417_05810	0.70	+0.3
1,294,366	+		PS417_05810	0.70	-0.6
1,294,366	+		PS417_05810	0.70	+0.8
1,294,499	-				+0.5
1,294,547	+				-2.3
1,294,548	-				-1.3
1,294,584	+				+0.8