Experiment: Polymyxin B sulfate 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03420 and PS417_03430 are separated by 576 nucleotides PS417_03430 and PS417_03435 overlap by 4 nucleotides
PS417_03420: PS417_03420 - hypothetical protein, at 784,645 to 788,943
_03420
PS417_03430: PS417_03430 - methyltransferase type 11, at 789,520 to 790,326
_03430
PS417_03435: PS417_03435 - cytochrome P450, at 790,323 to 792,323
_03435
Position (kb) 789
790
791 Strain fitness (log2 ratio) -2
-1
0
1 at 788.704 kb on + strand at 788.704 kb on + strand at 788.704 kb on + strand at 788.705 kb on - strand at 788.705 kb on - strand at 788.815 kb on + strand at 788.947 kb on + strand at 788.947 kb on + strand at 789.058 kb on - strand at 789.058 kb on - strand at 789.138 kb on + strand at 789.199 kb on + strand at 789.199 kb on + strand at 789.631 kb on + strand, within PS417_03430 at 789.632 kb on - strand, within PS417_03430 at 789.669 kb on + strand, within PS417_03430 at 789.670 kb on - strand, within PS417_03430 at 790.253 kb on + strand at 790.253 kb on - strand at 790.253 kb on - strand at 790.280 kb on + strand at 790.281 kb on - strand at 790.281 kb on - strand at 790.281 kb on - strand at 790.419 kb on + strand at 790.532 kb on + strand, within PS417_03435 at 790.532 kb on + strand, within PS417_03435 at 790.533 kb on - strand, within PS417_03435 at 791.018 kb on - strand, within PS417_03435 at 791.055 kb on + strand, within PS417_03435 at 791.245 kb on - strand, within PS417_03435 at 791.323 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.006 mg/ml remove 788,704 + -0.2 788,704 + +0.1 788,704 + -0.4 788,705 - -0.5 788,705 - +0.0 788,815 + -0.1 788,947 + -0.5 788,947 + -0.5 789,058 - +0.1 789,058 - +0.5 789,138 + -0.2 789,199 + +0.2 789,199 + +0.1 789,631 + PS417_03430 0.14 +0.2 789,632 - PS417_03430 0.14 -1.9 789,669 + PS417_03430 0.18 +0.2 789,670 - PS417_03430 0.19 -2.4 790,253 + +0.2 790,253 - -0.5 790,253 - +1.0 790,280 + +0.4 790,281 - -1.2 790,281 - -0.6 790,281 - +1.0 790,419 + +0.3 790,532 + PS417_03435 0.10 +0.3 790,532 + PS417_03435 0.10 -0.8 790,533 - PS417_03435 0.10 -0.3 791,018 - PS417_03435 0.35 -0.5 791,055 + PS417_03435 0.37 +0.2 791,245 - PS417_03435 0.46 -0.6 791,323 + +0.2
Or see this region's nucleotide sequence