Experiment: Polymyxin B sulfate 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22695 and PS417_22700 are separated by 196 nucleotides PS417_22700 and PS417_22705 are separated by 74 nucleotides
PS417_22695: PS417_22695 - glyceraldehyde-3-phosphate dehydrogenase, at 4,915,330 to 4,916,331
_22695
PS417_22700: PS417_22700 - RNA polymerase subunit sigma-24, at 4,916,528 to 4,917,046
_22700
PS417_22705: PS417_22705 - glycerol-3-phosphate ABC transporter substrate-binding protein, at 4,917,121 to 4,918,089
_22705
Position (kb)
4916
4917
4918 Strain fitness (log2 ratio)
-1
0
1 at 4915.665 kb on + strand, within PS417_22695 at 4915.665 kb on + strand, within PS417_22695 at 4915.666 kb on - strand, within PS417_22695 at 4915.666 kb on - strand, within PS417_22695 at 4915.733 kb on - strand, within PS417_22695 at 4916.152 kb on + strand, within PS417_22695 at 4916.155 kb on - strand, within PS417_22695 at 4916.155 kb on - strand, within PS417_22695 at 4916.263 kb on + strand at 4916.293 kb on - strand at 4916.293 kb on - strand at 4916.301 kb on + strand at 4916.329 kb on + strand at 4916.330 kb on - strand at 4916.643 kb on - strand, within PS417_22700 at 4916.702 kb on + strand, within PS417_22700 at 4917.008 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.016 kb on - strand at 4917.092 kb on + strand at 4917.092 kb on + strand at 4917.326 kb on + strand, within PS417_22705 at 4917.531 kb on - strand, within PS417_22705 at 4917.531 kb on - strand, within PS417_22705 at 4917.994 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.006 mg/ml remove 4,915,665 + PS417_22695 0.33 -0.0 4,915,665 + PS417_22695 0.33 +1.0 4,915,666 - PS417_22695 0.34 +0.2 4,915,666 - PS417_22695 0.34 -0.1 4,915,733 - PS417_22695 0.40 -0.4 4,916,152 + PS417_22695 0.82 -0.1 4,916,155 - PS417_22695 0.82 -1.4 4,916,155 - PS417_22695 0.82 -1.1 4,916,263 + +0.0 4,916,293 - -1.2 4,916,293 - -0.1 4,916,301 + +0.0 4,916,329 + -0.3 4,916,330 - -0.3 4,916,643 - PS417_22700 0.22 +0.7 4,916,702 + PS417_22700 0.34 -0.2 4,917,008 - -0.7 4,917,016 - +0.5 4,917,016 - +1.7 4,917,016 - +0.3 4,917,016 - +0.9 4,917,016 - +0.2 4,917,092 + -1.5 4,917,092 + +0.0 4,917,326 + PS417_22705 0.21 +0.4 4,917,531 - PS417_22705 0.42 +0.6 4,917,531 - PS417_22705 0.42 +0.2 4,917,994 + +0.0
Or see this region's nucleotide sequence