Strain Fitness in Pseudomonas simiae WCS417 around PS417_17785

Experiment: Polymyxin B sulfate 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.006 mg/ml
3,881,701	+				-1.0
3,881,702	-				+0.8
3,881,720	+				-0.9
3,881,724	+				-2.7
3,881,724	+				-2.5
3,881,725	-				-0.2
3,881,725	-				-1.1
3,881,727	+				-1.3
3,882,140	+		PS417_17780	0.58	+0.5
3,882,141	-		PS417_17780	0.58	-1.4
3,882,410	+				+1.0
3,882,421	+				-0.3
3,882,476	+				-0.0
3,882,477	-				-2.9
3,882,477	-				-2.1
3,882,489	+				-0.1
3,882,490	-				-4.1
3,882,494	-				-1.3
3,882,508	+				-0.5
3,882,509	-				-3.8
3,882,509	-				-4.1
3,882,555	+				-1.5
3,882,556	-				-3.4
3,882,575	-				-0.5
3,882,626	+				-2.5
3,882,626	+				-5.4
3,882,627	-				-4.1
3,882,627	-				-2.7
3,883,177	+				-1.5
3,883,178	-				+0.5
3,883,540	+		PS417_17785	0.57	-4.7
3,883,540	+		PS417_17785	0.57	-5.1
3,883,541	-		PS417_17785	0.57	-3.9
3,883,541	-		PS417_17785	0.57	-5.8
3,883,584	+				-1.5
3,883,584	+		PS417_17785	0.60	-3.3
3,883,585	-		PS417_17785	0.60	-1.5
3,883,585	-		PS417_17785	0.60	-4.8
3,883,585	-		PS417_17785	0.60	-6.1
3,883,585	-		PS417_17785	0.60	-2.1
3,883,684	+		PS417_17785	0.66	-2.8
3,883,708	+		PS417_17785	0.67	-4.1
3,884,017	+		PS417_17785	0.86	-3.9
3,884,018	-		PS417_17785	0.86	-6.3
3,884,018	-		PS417_17785	0.86	-2.7
3,884,054	-		PS417_17785	0.88	-4.1
3,884,066	+		PS417_17785	0.89	-3.5
3,884,067	-		PS417_17785	0.89	-3.4
3,884,138	+				-3.9
3,884,206	+				-3.3
3,884,209	+				-3.8
3,884,209	+				-4.1
3,884,210	-				-1.5
3,884,258	+				-0.1
3,884,322	+				+0.4
3,884,322	+				-0.3
3,884,397	-				+0.7
3,884,558	+				-0.3
3,884,559	-				+0.4
3,884,600	-				-1.1
3,884,618	-				+0.2
3,884,618	-				+1.0
3,884,628	+				+0.4
3,884,629	-				-0.2
3,884,688	+		PS417_17790	0.17	-1.0
3,884,688	+		PS417_17790	0.17	-0.2
3,884,688	+		PS417_17790	0.17	+0.8
3,884,688	+				-1.1
3,884,689	-		PS417_17790	0.17	-0.7
3,884,832	-		PS417_17790	0.37	-0.2
3,884,893	-		PS417_17790	0.45	+0.2
3,885,047	+		PS417_17790	0.67	+0.5
3,885,048	-		PS417_17790	0.67	-0.4
3,885,192	-		PS417_17790	0.87	-0.8
3,885,223	+				+1.1
3,885,224	-				-0.2