Experiment: Polymyxin B sulfate 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14960 and PS417_14965 are separated by 0 nucleotides PS417_14965 and PS417_14970 are separated by 156 nucleotides
PS417_14960: PS417_14960 - ATPase, at 3,270,475 to 3,271,755
_14960
PS417_14965: PS417_14965 - transcriptional regulator, at 3,271,756 to 3,272,463
_14965
PS417_14970: PS417_14970 - MFS transporter, at 3,272,620 to 3,273,819
_14970
Position (kb)
3271
3272
3273 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3270.965 kb on + strand, within PS417_14960 at 3270.965 kb on + strand, within PS417_14960 at 3270.969 kb on + strand, within PS417_14960 at 3270.969 kb on + strand, within PS417_14960 at 3271.013 kb on + strand, within PS417_14960 at 3271.013 kb on + strand, within PS417_14960 at 3271.013 kb on + strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.276 kb on - strand, within PS417_14960 at 3271.349 kb on + strand, within PS417_14960 at 3271.361 kb on + strand, within PS417_14960 at 3271.361 kb on + strand, within PS417_14960 at 3271.371 kb on + strand, within PS417_14960 at 3271.613 kb on + strand at 3271.613 kb on + strand, within PS417_14960 at 3271.614 kb on - strand, within PS417_14960 at 3271.683 kb on - strand at 3271.730 kb on + strand at 3271.730 kb on + strand at 3271.743 kb on - strand at 3271.757 kb on + strand at 3271.866 kb on - strand, within PS417_14965 at 3271.866 kb on - strand, within PS417_14965 at 3271.866 kb on - strand, within PS417_14965 at 3272.157 kb on - strand, within PS417_14965 at 3272.300 kb on - strand, within PS417_14965 at 3272.366 kb on - strand, within PS417_14965 at 3272.505 kb on + strand at 3272.505 kb on + strand at 3272.506 kb on - strand at 3272.506 kb on - strand at 3272.583 kb on + strand at 3272.620 kb on - strand at 3272.620 kb on - strand at 3272.773 kb on + strand, within PS417_14970 at 3273.004 kb on + strand, within PS417_14970 at 3273.005 kb on - strand, within PS417_14970 at 3273.023 kb on - strand, within PS417_14970 at 3273.373 kb on + strand, within PS417_14970 at 3273.373 kb on + strand, within PS417_14970 at 3273.373 kb on + strand, within PS417_14970 at 3273.373 kb on + strand, within PS417_14970 at 3273.373 kb on + strand, within PS417_14970 at 3273.373 kb on + strand, within PS417_14970 at 3273.374 kb on - strand, within PS417_14970 at 3273.374 kb on - strand, within PS417_14970
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.006 mg/ml remove 3,270,965 + PS417_14960 0.38 -4.7 3,270,965 + PS417_14960 0.38 -2.4 3,270,969 + PS417_14960 0.39 -2.8 3,270,969 + PS417_14960 0.39 -3.2 3,271,013 + PS417_14960 0.42 -0.7 3,271,013 + PS417_14960 0.42 -2.7 3,271,013 + PS417_14960 0.42 -0.8 3,271,014 - PS417_14960 0.42 -3.5 3,271,014 - PS417_14960 0.42 -1.7 3,271,014 - PS417_14960 0.42 -1.8 3,271,014 - PS417_14960 0.42 -2.6 3,271,276 - PS417_14960 0.63 -1.7 3,271,349 + PS417_14960 0.68 -2.0 3,271,361 + PS417_14960 0.69 -3.3 3,271,361 + PS417_14960 0.69 -3.5 3,271,371 + PS417_14960 0.70 -2.6 3,271,613 + -2.3 3,271,613 + PS417_14960 0.89 -2.8 3,271,614 - PS417_14960 0.89 -2.8 3,271,683 - -0.3 3,271,730 + -1.1 3,271,730 + -2.5 3,271,743 - -2.0 3,271,757 + -2.4 3,271,866 - PS417_14965 0.16 -2.1 3,271,866 - PS417_14965 0.16 -1.0 3,271,866 - PS417_14965 0.16 -2.0 3,272,157 - PS417_14965 0.57 -1.3 3,272,300 - PS417_14965 0.77 +0.0 3,272,366 - PS417_14965 0.86 -1.0 3,272,505 + -0.9 3,272,505 + -1.9 3,272,506 - -1.0 3,272,506 - +1.2 3,272,583 + +0.3 3,272,620 - +0.4 3,272,620 - +0.7 3,272,773 + PS417_14970 0.13 -1.5 3,273,004 + PS417_14970 0.32 -0.0 3,273,005 - PS417_14970 0.32 -0.7 3,273,023 - PS417_14970 0.34 -1.3 3,273,373 + PS417_14970 0.63 -0.9 3,273,373 + PS417_14970 0.63 -1.0 3,273,373 + PS417_14970 0.63 -2.8 3,273,373 + PS417_14970 0.63 +0.1 3,273,373 + PS417_14970 0.63 +1.0 3,273,373 + PS417_14970 0.63 +0.4 3,273,374 - PS417_14970 0.63 -0.3 3,273,374 - PS417_14970 0.63 -0.3
Or see this region's nucleotide sequence