Experiment: Polymyxin B sulfate 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14690 and PS417_14695 are separated by 804 nucleotides PS417_14695 and PS417_14700 are separated by 110 nucleotides
PS417_14690: PS417_14690 - chemotaxis protein, at 3,207,977 to 3,209,632
_14690
PS417_14695: PS417_14695 - hypothetical protein, at 3,210,437 to 3,210,859
_14695
PS417_14700: PS417_14700 - hypothetical protein, at 3,210,970 to 3,211,446
_14700
Position (kb)
3210
3211 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3209.704 kb on - strand at 3209.704 kb on - strand at 3209.704 kb on - strand at 3209.845 kb on + strand at 3209.888 kb on - strand at 3209.919 kb on - strand at 3210.051 kb on - strand at 3210.113 kb on + strand at 3210.150 kb on + strand at 3210.150 kb on + strand at 3210.161 kb on + strand at 3210.224 kb on + strand at 3210.344 kb on + strand at 3210.375 kb on - strand at 3210.375 kb on - strand at 3210.375 kb on - strand at 3210.380 kb on + strand at 3210.381 kb on - strand at 3210.426 kb on + strand at 3210.439 kb on - strand at 3210.531 kb on + strand, within PS417_14695 at 3210.531 kb on + strand, within PS417_14695 at 3210.532 kb on - strand, within PS417_14695 at 3210.532 kb on - strand, within PS417_14695 at 3210.654 kb on + strand, within PS417_14695 at 3210.655 kb on - strand, within PS417_14695 at 3210.779 kb on + strand, within PS417_14695 at 3210.779 kb on + strand, within PS417_14695 at 3210.780 kb on - strand, within PS417_14695 at 3210.852 kb on + strand at 3210.852 kb on + strand at 3210.852 kb on + strand at 3210.853 kb on - strand at 3210.927 kb on + strand at 3210.927 kb on + strand at 3210.928 kb on - strand at 3210.928 kb on - strand at 3210.928 kb on - strand at 3210.961 kb on + strand at 3210.961 kb on + strand at 3211.250 kb on + strand, within PS417_14700 at 3211.698 kb on + strand at 3211.698 kb on + strand at 3211.698 kb on + strand at 3211.699 kb on - strand at 3211.776 kb on + strand at 3211.776 kb on + strand at 3211.776 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.006 mg/ml remove 3,209,704 - +1.4 3,209,704 - -1.1 3,209,704 - +1.5 3,209,845 + +1.0 3,209,888 - +0.1 3,209,919 - -0.3 3,210,051 - -1.0 3,210,113 + +0.4 3,210,150 + -1.6 3,210,150 + +0.6 3,210,161 + +0.3 3,210,224 + +0.4 3,210,344 + +0.1 3,210,375 - -0.1 3,210,375 - +1.9 3,210,375 - -0.1 3,210,380 + -0.2 3,210,381 - +1.5 3,210,426 + +0.8 3,210,439 - +1.3 3,210,531 + PS417_14695 0.22 -2.3 3,210,531 + PS417_14695 0.22 -0.3 3,210,532 - PS417_14695 0.22 +0.4 3,210,532 - PS417_14695 0.22 +0.3 3,210,654 + PS417_14695 0.51 -0.3 3,210,655 - PS417_14695 0.52 -1.1 3,210,779 + PS417_14695 0.81 +0.1 3,210,779 + PS417_14695 0.81 -0.6 3,210,780 - PS417_14695 0.81 -1.4 3,210,852 + +0.9 3,210,852 + -0.1 3,210,852 + +0.6 3,210,853 - -0.1 3,210,927 + +0.1 3,210,927 + +0.1 3,210,928 - -0.5 3,210,928 - +0.0 3,210,928 - -0.7 3,210,961 + -0.1 3,210,961 + +0.3 3,211,250 + PS417_14700 0.59 +0.6 3,211,698 + -0.1 3,211,698 + +0.3 3,211,698 + +2.1 3,211,699 - -0.9 3,211,776 + +0.2 3,211,776 + +0.0 3,211,776 + -0.0
Or see this region's nucleotide sequence