Strain Fitness in Pseudomonas simiae WCS417 around PS417_09780

Experiment: Polymyxin B sulfate 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.006 mg/ml
2,118,947	+		PS417_09775	0.39	-0.1
2,119,583	+				-1.3
2,119,584	-				-1.3
2,119,592	+				-0.1
2,119,593	-				-0.6
2,119,669	+				-0.2
2,119,688	-				+0.3
2,119,694	-				-0.2
2,119,743	+				+0.5
2,119,744	-				-0.4
2,119,780	+				-1.7
2,119,780	+				-0.3
2,119,781	-				+0.3
2,119,894	+				-0.2
2,119,964	-				-0.3
2,119,964	-				+0.9
2,119,964	-				-0.7
2,120,140	-		PS417_09780	0.15	-0.7
2,120,292	+		PS417_09780	0.22	-0.2
2,120,292	+		PS417_09780	0.22	-0.8
2,120,433	+				-1.0
2,120,433	+		PS417_09780	0.29	-1.0
2,120,434	-		PS417_09780	0.29	-0.6
2,120,434	-		PS417_09780	0.29	-0.2
2,120,436	-		PS417_09780	0.29	-1.0
2,120,601	+				+1.2
2,120,744	-		PS417_09780	0.45	+0.4
2,120,922	-		PS417_09780	0.53	+1.6
2,120,997	+		PS417_09780	0.57	+0.1
2,120,997	+		PS417_09780	0.57	-0.4
2,120,998	-		PS417_09780	0.57	-0.1
2,120,998	-				-0.4
2,121,050	+		PS417_09780	0.60	-0.8
2,121,050	+		PS417_09780	0.60	-0.4
2,121,051	-		PS417_09780	0.60	+0.7
2,121,216	+		PS417_09780	0.68	-0.3
2,121,216	+		PS417_09780	0.68	-0.7
2,121,217	-		PS417_09780	0.68	-0.7
2,121,294	+		PS417_09780	0.72	+0.9
2,121,294	+		PS417_09780	0.72	+0.3
2,121,294	+		PS417_09780	0.72	-0.3
2,121,294	+		PS417_09780	0.72	+0.1
2,121,295	-		PS417_09780	0.72	-1.1
2,121,295	-		PS417_09780	0.72	-0.1
2,121,328	-		PS417_09780	0.73	+1.6
2,121,496	-		PS417_09780	0.82	-0.6
2,121,737	+				-0.1
2,121,738	-				-0.2
2,121,801	+				-0.2
2,121,802	-				+0.6
2,121,998	+		PS417_09785	0.16	+1.6
2,122,078	-		PS417_09785	0.26	-0.5
2,122,078	-		PS417_09785	0.26	-0.8
2,122,092	+		PS417_09785	0.27	+1.3
2,122,304	+		PS417_09785	0.53	+0.9
2,122,427	-		PS417_09785	0.67	+0.2
2,122,436	+		PS417_09785	0.68	-0.7
2,122,450	-		PS417_09785	0.70	-0.3
2,122,450	-		PS417_09785	0.70	-0.4
2,122,450	-		PS417_09785	0.70	-1.5
2,122,697	+				+0.3