Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2155

Experiment: marine_broth_2216 with nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2154 and B158DRAFT_2155 are separated by 188 nucleotidesB158DRAFT_2155 and B158DRAFT_2156 are separated by 63 nucleotides B158DRAFT_2154: B158DRAFT_2154 - tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4), at 292,846 to 293,769 _2154 B158DRAFT_2155: B158DRAFT_2155 - HhH-GPD superfamily base excision DNA repair protein., at 293,958 to 294,593 _2155 B158DRAFT_2156: B158DRAFT_2156 - Uncharacterized membrane protein, required for spore maturation in B.subtilis., at 294,657 to 295,886 _2156 Position (kb) 293 294 295Strain fitness (log2 ratio) -3 -2 -1 0 1at 292.959 kb on + strand, within B158DRAFT_2154at 292.959 kb on + strand, within B158DRAFT_2154at 292.967 kb on - strand, within B158DRAFT_2154at 293.025 kb on - strand, within B158DRAFT_2154at 293.063 kb on + strand, within B158DRAFT_2154at 293.063 kb on + strand, within B158DRAFT_2154at 293.181 kb on - strand, within B158DRAFT_2154at 293.249 kb on + strand, within B158DRAFT_2154at 293.322 kb on - strand, within B158DRAFT_2154at 293.322 kb on - strand, within B158DRAFT_2154at 293.348 kb on + strand, within B158DRAFT_2154at 293.384 kb on - strand, within B158DRAFT_2154at 293.388 kb on + strand, within B158DRAFT_2154at 293.420 kb on - strand, within B158DRAFT_2154at 293.434 kb on + strand, within B158DRAFT_2154at 293.461 kb on + strand, within B158DRAFT_2154at 293.461 kb on + strand, within B158DRAFT_2154at 293.469 kb on - strand, within B158DRAFT_2154at 293.469 kb on - strand, within B158DRAFT_2154at 293.482 kb on - strand, within B158DRAFT_2154at 293.496 kb on - strand, within B158DRAFT_2154at 293.529 kb on + strand, within B158DRAFT_2154at 293.552 kb on - strand, within B158DRAFT_2154at 293.564 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.595 kb on + strand, within B158DRAFT_2154at 293.597 kb on + strand, within B158DRAFT_2154at 293.597 kb on + strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.603 kb on - strand, within B158DRAFT_2154at 293.605 kb on - strand, within B158DRAFT_2154at 293.605 kb on - strand, within B158DRAFT_2154at 293.646 kb on + strand, within B158DRAFT_2154at 293.653 kb on - strand, within B158DRAFT_2154at 293.681 kb on + strandat 293.722 kb on - strandat 293.916 kb on - strandat 294.003 kb on + strandat 294.003 kb on + strandat 294.011 kb on - strandat 294.019 kb on - strandat 294.067 kb on + strand, within B158DRAFT_2155at 294.072 kb on + strand, within B158DRAFT_2155at 294.072 kb on + strand, within B158DRAFT_2155at 294.072 kb on + strand, within B158DRAFT_2155at 294.168 kb on + strand, within B158DRAFT_2155at 294.168 kb on + strand, within B158DRAFT_2155at 294.168 kb on + strand, within B158DRAFT_2155at 294.186 kb on + strand, within B158DRAFT_2155at 294.217 kb on + strand, within B158DRAFT_2155at 294.233 kb on + strand, within B158DRAFT_2155at 294.249 kb on - strand, within B158DRAFT_2155at 294.249 kb on - strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.264 kb on + strand, within B158DRAFT_2155at 294.272 kb on - strand, within B158DRAFT_2155at 294.272 kb on - strand, within B158DRAFT_2155at 294.272 kb on - strand, within B158DRAFT_2155at 294.272 kb on - strand, within B158DRAFT_2155at 294.272 kb on - strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.285 kb on + strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.293 kb on - strand, within B158DRAFT_2155at 294.295 kb on + strand, within B158DRAFT_2155at 294.321 kb on + strand, within B158DRAFT_2155at 294.348 kb on - strand, within B158DRAFT_2155at 294.358 kb on + strand, within B158DRAFT_2155at 294.376 kb on + strand, within B158DRAFT_2155at 294.384 kb on - strand, within B158DRAFT_2155at 294.415 kb on + strand, within B158DRAFT_2155at 294.487 kb on - strand, within B158DRAFT_2155at 294.515 kb on - strand, within B158DRAFT_2155at 294.515 kb on - strand, within B158DRAFT_2155at 294.538 kb on - strandat 294.624 kb on - strandat 294.624 kb on - strandat 294.625 kb on + strandat 294.699 kb on + strandat 294.704 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.718 kb on + strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.726 kb on - strandat 294.736 kb on - strandat 294.736 kb on - strandat 294.753 kb on + strandat 294.763 kb on - strandat 294.763 kb on - strandat 294.812 kb on - strand, within B158DRAFT_2156at 294.939 kb on + strand, within B158DRAFT_2156at 294.939 kb on + strand, within B158DRAFT_2156at 294.947 kb on - strand, within B158DRAFT_2156at 294.957 kb on - strand, within B158DRAFT_2156at 295.035 kb on - strand, within B158DRAFT_2156at 295.036 kb on + strand, within B158DRAFT_2156at 295.036 kb on + strand, within B158DRAFT_2156at 295.036 kb on + strand, within B158DRAFT_2156at 295.096 kb on + strand, within B158DRAFT_2156at 295.130 kb on + strand, within B158DRAFT_2156at 295.130 kb on + strand, within B158DRAFT_2156at 295.136 kb on - strand, within B158DRAFT_2156at 295.140 kb on + strand, within B158DRAFT_2156at 295.176 kb on - strand, within B158DRAFT_2156at 295.235 kb on - strand, within B158DRAFT_2156at 295.244 kb on - strand, within B158DRAFT_2156at 295.313 kb on - strand, within B158DRAFT_2156at 295.320 kb on + strand, within B158DRAFT_2156at 295.343 kb on - strand, within B158DRAFT_2156at 295.346 kb on - strand, within B158DRAFT_2156at 295.347 kb on + strand, within B158DRAFT_2156at 295.352 kb on + strand, within B158DRAFT_2156at 295.395 kb on - strand, within B158DRAFT_2156at 295.434 kb on + strand, within B158DRAFT_2156at 295.456 kb on + strand, within B158DRAFT_2156at 295.456 kb on + strand, within B158DRAFT_2156at 295.528 kb on + strand, within B158DRAFT_2156at 295.535 kb on - strand, within B158DRAFT_2156at 295.566 kb on + strand, within B158DRAFT_2156at 295.571 kb on + strand, within B158DRAFT_2156at 295.574 kb on - strand, within B158DRAFT_2156at 295.579 kb on - strand, within B158DRAFT_2156

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with nitrite 20 mM
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292,959 + B158DRAFT_2154 0.12 -0.4
292,959 + B158DRAFT_2154 0.12 +0.0
292,967 - B158DRAFT_2154 0.13 +0.1
293,025 - B158DRAFT_2154 0.19 +0.6
293,063 + B158DRAFT_2154 0.23 -1.1
293,063 + B158DRAFT_2154 0.23 -0.1
293,181 - B158DRAFT_2154 0.36 -0.0
293,249 + B158DRAFT_2154 0.44 +0.4
293,322 - B158DRAFT_2154 0.52 +0.2
293,322 - B158DRAFT_2154 0.52 -0.0
293,348 + B158DRAFT_2154 0.54 -0.3
293,384 - B158DRAFT_2154 0.58 -0.1
293,388 + B158DRAFT_2154 0.59 -1.2
293,420 - B158DRAFT_2154 0.62 -0.1
293,434 + B158DRAFT_2154 0.64 -1.1
293,461 + B158DRAFT_2154 0.67 +0.2
293,461 + B158DRAFT_2154 0.67 +0.1
293,469 - B158DRAFT_2154 0.67 -0.2
293,469 - B158DRAFT_2154 0.67 -0.1
293,482 - B158DRAFT_2154 0.69 -0.5
293,496 - B158DRAFT_2154 0.70 -0.1
293,529 + B158DRAFT_2154 0.74 +0.0
293,552 - B158DRAFT_2154 0.76 -0.2
293,564 + B158DRAFT_2154 0.78 +0.7
293,595 + B158DRAFT_2154 0.81 -0.1
293,595 + B158DRAFT_2154 0.81 +0.7
293,595 + B158DRAFT_2154 0.81 -0.1
293,595 + B158DRAFT_2154 0.81 -0.3
293,595 + B158DRAFT_2154 0.81 -0.0
293,595 + B158DRAFT_2154 0.81 +0.2
293,595 + B158DRAFT_2154 0.81 -0.2
293,595 + B158DRAFT_2154 0.81 +0.3
293,595 + B158DRAFT_2154 0.81 +0.4
293,595 + B158DRAFT_2154 0.81 -0.4
293,595 + B158DRAFT_2154 0.81 -0.5
293,595 + B158DRAFT_2154 0.81 -2.1
293,595 + B158DRAFT_2154 0.81 +0.0
293,595 + B158DRAFT_2154 0.81 -0.4
293,595 + B158DRAFT_2154 0.81 -0.2
293,595 + B158DRAFT_2154 0.81 -0.4
293,595 + B158DRAFT_2154 0.81 +0.1
293,595 + B158DRAFT_2154 0.81 +0.2
293,595 + B158DRAFT_2154 0.81 -0.0
293,595 + B158DRAFT_2154 0.81 -0.2
293,595 + B158DRAFT_2154 0.81 -0.8
293,595 + B158DRAFT_2154 0.81 -0.5
293,597 + B158DRAFT_2154 0.81 -0.2
293,597 + B158DRAFT_2154 0.81 +0.2
293,603 - B158DRAFT_2154 0.82 -1.9
293,603 - B158DRAFT_2154 0.82 +0.8
293,603 - B158DRAFT_2154 0.82 -0.8
293,603 - B158DRAFT_2154 0.82 -0.4
293,603 - B158DRAFT_2154 0.82 +0.2
293,603 - B158DRAFT_2154 0.82 +0.1
293,603 - B158DRAFT_2154 0.82 +1.1
293,603 - B158DRAFT_2154 0.82 -0.6
293,603 - B158DRAFT_2154 0.82 -1.6
293,603 - B158DRAFT_2154 0.82 +0.2
293,603 - B158DRAFT_2154 0.82 -0.1
293,603 - B158DRAFT_2154 0.82 +0.0
293,603 - B158DRAFT_2154 0.82 -0.3
293,603 - B158DRAFT_2154 0.82 +0.1
293,603 - B158DRAFT_2154 0.82 +0.6
293,603 - B158DRAFT_2154 0.82 -0.4
293,603 - B158DRAFT_2154 0.82 -0.3
293,603 - B158DRAFT_2154 0.82 +0.1
293,603 - B158DRAFT_2154 0.82 -0.5
293,603 - B158DRAFT_2154 0.82 +0.6
293,603 - B158DRAFT_2154 0.82 -0.4
293,603 - B158DRAFT_2154 0.82 -0.2
293,605 - B158DRAFT_2154 0.82 -0.0
293,605 - B158DRAFT_2154 0.82 -0.4
293,646 + B158DRAFT_2154 0.87 -0.2
293,653 - B158DRAFT_2154 0.87 +0.6
293,681 + -0.0
293,722 - +0.1
293,916 - -2.0
294,003 + +0.2
294,003 + +0.2
294,011 - -1.0
294,019 - -0.7
294,067 + B158DRAFT_2155 0.17 -0.5
294,072 + B158DRAFT_2155 0.18 +0.0
294,072 + B158DRAFT_2155 0.18 -0.5
294,072 + B158DRAFT_2155 0.18 -0.3
294,168 + B158DRAFT_2155 0.33 -1.5
294,168 + B158DRAFT_2155 0.33 -1.4
294,168 + B158DRAFT_2155 0.33 -0.4
294,186 + B158DRAFT_2155 0.36 -1.1
294,217 + B158DRAFT_2155 0.41 -0.1
294,233 + B158DRAFT_2155 0.43 -0.8
294,249 - B158DRAFT_2155 0.46 -0.5
294,249 - B158DRAFT_2155 0.46 +0.0
294,264 + B158DRAFT_2155 0.48 -0.7
294,264 + B158DRAFT_2155 0.48 -0.5
294,264 + B158DRAFT_2155 0.48 -0.9
294,264 + B158DRAFT_2155 0.48 +0.0
294,264 + B158DRAFT_2155 0.48 +0.7
294,264 + B158DRAFT_2155 0.48 +0.1
294,264 + B158DRAFT_2155 0.48 -1.5
294,272 - B158DRAFT_2155 0.49 +0.2
294,272 - B158DRAFT_2155 0.49 +0.3
294,272 - B158DRAFT_2155 0.49 +0.3
294,272 - B158DRAFT_2155 0.49 -0.4
294,272 - B158DRAFT_2155 0.49 -0.0
294,285 + B158DRAFT_2155 0.51 +0.2
294,285 + B158DRAFT_2155 0.51 -0.1
294,285 + B158DRAFT_2155 0.51 +0.1
294,285 + B158DRAFT_2155 0.51 -0.4
294,285 + B158DRAFT_2155 0.51 -0.2
294,285 + B158DRAFT_2155 0.51 -0.1
294,285 + B158DRAFT_2155 0.51 +0.2
294,285 + B158DRAFT_2155 0.51 -0.1
294,285 + B158DRAFT_2155 0.51 -0.0
294,285 + B158DRAFT_2155 0.51 +0.4
294,285 + B158DRAFT_2155 0.51 -0.6
294,285 + B158DRAFT_2155 0.51 -0.4
294,285 + B158DRAFT_2155 0.51 +0.9
294,293 - B158DRAFT_2155 0.53 +0.4
294,293 - B158DRAFT_2155 0.53 -0.5
294,293 - B158DRAFT_2155 0.53 -0.4
294,293 - B158DRAFT_2155 0.53 -1.2
294,293 - B158DRAFT_2155 0.53 -0.2
294,293 - B158DRAFT_2155 0.53 -1.1
294,293 - B158DRAFT_2155 0.53 -0.4
294,293 - B158DRAFT_2155 0.53 +0.2
294,295 + B158DRAFT_2155 0.53 -0.4
294,321 + B158DRAFT_2155 0.57 +0.2
294,348 - B158DRAFT_2155 0.61 -0.5
294,358 + B158DRAFT_2155 0.63 -0.4
294,376 + B158DRAFT_2155 0.66 +0.4
294,384 - B158DRAFT_2155 0.67 -1.1
294,415 + B158DRAFT_2155 0.72 +0.2
294,487 - B158DRAFT_2155 0.83 +0.3
294,515 - B158DRAFT_2155 0.88 -0.3
294,515 - B158DRAFT_2155 0.88 +0.3
294,538 - -0.3
294,624 - -1.2
294,624 - -0.1
294,625 + -0.0
294,699 + -0.9
294,704 + -0.1
294,718 + +0.2
294,718 + -0.5
294,718 + -0.3
294,718 + -0.7
294,718 + +0.0
294,718 + -0.5
294,718 + -0.1
294,718 + +0.1
294,718 + -0.3
294,718 + -2.9
294,726 - -0.2
294,726 - -0.1
294,726 - -0.5
294,726 - -0.4
294,726 - -2.2
294,726 - -0.4
294,726 - -0.2
294,726 - +0.6
294,736 - +0.3
294,736 - +0.3
294,753 + +0.3
294,763 - -0.3
294,763 - +0.4
294,812 - B158DRAFT_2156 0.13 -0.4
294,939 + B158DRAFT_2156 0.23 -0.1
294,939 + B158DRAFT_2156 0.23 +0.1
294,947 - B158DRAFT_2156 0.24 -0.4
294,957 - B158DRAFT_2156 0.24 +0.0
295,035 - B158DRAFT_2156 0.31 -0.3
295,036 + B158DRAFT_2156 0.31 +0.1
295,036 + B158DRAFT_2156 0.31 -0.2
295,036 + B158DRAFT_2156 0.31 -0.5
295,096 + B158DRAFT_2156 0.36 -0.8
295,130 + B158DRAFT_2156 0.38 -0.4
295,130 + B158DRAFT_2156 0.38 -0.2
295,136 - B158DRAFT_2156 0.39 -0.3
295,140 + B158DRAFT_2156 0.39 -0.7
295,176 - B158DRAFT_2156 0.42 -0.4
295,235 - B158DRAFT_2156 0.47 -0.4
295,244 - B158DRAFT_2156 0.48 -1.0
295,313 - B158DRAFT_2156 0.53 -0.2
295,320 + B158DRAFT_2156 0.54 +0.3
295,343 - B158DRAFT_2156 0.56 -0.1
295,346 - B158DRAFT_2156 0.56 -0.3
295,347 + B158DRAFT_2156 0.56 -0.6
295,352 + B158DRAFT_2156 0.57 -0.4
295,395 - B158DRAFT_2156 0.60 +0.8
295,434 + B158DRAFT_2156 0.63 -0.3
295,456 + B158DRAFT_2156 0.65 -0.3
295,456 + B158DRAFT_2156 0.65 -0.1
295,528 + B158DRAFT_2156 0.71 -1.0
295,535 - B158DRAFT_2156 0.71 -0.6
295,566 + B158DRAFT_2156 0.74 -0.3
295,571 + B158DRAFT_2156 0.74 +0.2
295,574 - B158DRAFT_2156 0.75 -0.2
295,579 - B158DRAFT_2156 0.75 +0.1

Or see this region's nucleotide sequence